Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL512625.2-201ENST00000417533 625 ntBASIC29.06■■■□□ 2.24
ABCA3Q99758 BET1L-207ENST00000529614 560 ntTSL 5 BASIC29.06■■■□□ 2.24
ABCA3Q99758 MMD2-204ENST00000612910 778 ntTSL 5 BASIC29.06■■■□□ 2.24
ABCA3Q99758 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.06■■■□□ 2.24
ABCA3Q99758 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
ABCA3Q99758 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
ABCA3Q99758 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC29.05■■■□□ 2.24
ABCA3Q99758 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC29.05■■■□□ 2.24
ABCA3Q99758 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
ABCA3Q99758 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
ABCA3Q99758 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
ABCA3Q99758 ESRRAP1-201ENST00000400596 1257 ntBASIC29.05■■■□□ 2.24
ABCA3Q99758 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC29.05■■■□□ 2.24
ABCA3Q99758 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC29.05■■■□□ 2.24
ABCA3Q99758 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
ABCA3Q99758 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC29.04■■■□□ 2.24
ABCA3Q99758 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC29.04■■■□□ 2.24
ABCA3Q99758 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC29.04■■■□□ 2.24
ABCA3Q99758 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
ABCA3Q99758 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC29.04■■■□□ 2.24
ABCA3Q99758 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC29.04■■■□□ 2.24
ABCA3Q99758 UNC93B5-201ENST00000530315 699 ntBASIC29.04■■■□□ 2.24
ABCA3Q99758 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC29.04■■■□□ 2.24
ABCA3Q99758 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC29.04■■■□□ 2.24
ABCA3Q99758 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
ABCA3Q99758 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
ABCA3Q99758 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
ABCA3Q99758 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
ABCA3Q99758 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
ABCA3Q99758 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC29.03■■■□□ 2.24
ABCA3Q99758 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC29.03■■■□□ 2.24
ABCA3Q99758 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
ABCA3Q99758 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
ABCA3Q99758 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
ABCA3Q99758 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
ABCA3Q99758 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
ABCA3Q99758 AP003097.1-201ENST00000530657 1135 ntBASIC29.03■■■□□ 2.24
ABCA3Q99758 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.03■■■□□ 2.24
ABCA3Q99758 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC29.03■■■□□ 2.24
ABCA3Q99758 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.03■■■□□ 2.24
ABCA3Q99758 FGF8-207ENST00000618991 856 ntTSL 3 BASIC29.03■■■□□ 2.24
ABCA3Q99758 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
ABCA3Q99758 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
ABCA3Q99758 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC29.02■■■□□ 2.24
ABCA3Q99758 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC29.02■■■□□ 2.24
ABCA3Q99758 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC29.02■■■□□ 2.24
ABCA3Q99758 RHOD-202ENST00000532559 538 ntTSL 3 BASIC29.02■■■□□ 2.24
ABCA3Q99758 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
ABCA3Q99758 AP004607.7-201ENST00000527152 1677 ntBASIC29.01■■■□□ 2.24
ABCA3Q99758 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC29.01■■■□□ 2.24
ABCA3Q99758 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC29.01■■■□□ 2.24
ABCA3Q99758 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.01■■■□□ 2.23
ABCA3Q99758 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC29.01■■■□□ 2.23
ABCA3Q99758 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC29.01■■■□□ 2.23
ABCA3Q99758 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC29.01■■■□□ 2.23
ABCA3Q99758 AP006294.2-201ENST00000641667 209 ntBASIC29.01■■■□□ 2.23
ABCA3Q99758 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.01■■■□□ 2.23
ABCA3Q99758 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
ABCA3Q99758 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
ABCA3Q99758 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
ABCA3Q99758 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
ABCA3Q99758 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
ABCA3Q99758 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
ABCA3Q99758 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC29■■■□□ 2.23
ABCA3Q99758 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
ABCA3Q99758 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
ABCA3Q99758 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC29■■■□□ 2.23
ABCA3Q99758 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC29■■■□□ 2.23
ABCA3Q99758 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC29■■■□□ 2.23
ABCA3Q99758 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC29■■■□□ 2.23
ABCA3Q99758 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC28.99■■■□□ 2.23
ABCA3Q99758 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA3Q99758 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
ABCA3Q99758 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA3Q99758 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC28.98■■■□□ 2.23
ABCA3Q99758 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
ABCA3Q99758 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 AC128676.1-201ENST00000454392 318 ntBASIC28.98■■■□□ 2.23
ABCA3Q99758 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC28.98■■■□□ 2.23
ABCA3Q99758 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.98■■■□□ 2.23
ABCA3Q99758 LINC01960-201ENST00000563759 1884 ntBASIC28.98■■■□□ 2.23
ABCA3Q99758 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 AC010980.2-201ENST00000587099 1412 ntBASIC28.98■■■□□ 2.23
ABCA3Q99758 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.98■■■□□ 2.23
ABCA3Q99758 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA3Q99758 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC28.97■■■□□ 2.23
ABCA3Q99758 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA3Q99758 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
ABCA3Q99758 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA3Q99758 AL034346.1-201ENST00000568244 1277 ntBASIC28.97■■■□□ 2.23
ABCA3Q99758 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA3Q99758 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC28.97■■■□□ 2.23
ABCA3Q99758 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms