Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL049796.1-201ENST00000565336 1766 ntBASIC14.33□□□□□ -0.12
LITAFQ99732 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
LITAFQ99732 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LITAFQ99732 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.33□□□□□ -0.12
LITAFQ99732 AC133552.2-201ENST00000619106 1032 ntBASIC14.33□□□□□ -0.12
LITAFQ99732 AC009086.3-201ENST00000623486 1008 ntBASIC14.33□□□□□ -0.12
LITAFQ99732 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LITAFQ99732 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LITAFQ99732 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LITAFQ99732 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LITAFQ99732 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.33□□□□□ -0.12
LITAFQ99732 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LITAFQ99732 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LITAFQ99732 AC073314.1-201ENST00000568729 2216 ntBASIC14.33□□□□□ -0.12
LITAFQ99732 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LITAFQ99732 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LITAFQ99732 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
LITAFQ99732 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.32□□□□□ -0.12
LITAFQ99732 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.32□□□□□ -0.12
LITAFQ99732 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.32□□□□□ -0.12
LITAFQ99732 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.32□□□□□ -0.12
LITAFQ99732 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.32□□□□□ -0.12
LITAFQ99732 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.32□□□□□ -0.12
LITAFQ99732 SPCS2P3-201ENST00000500401 656 ntBASIC14.32□□□□□ -0.12
LITAFQ99732 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LITAFQ99732 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.32□□□□□ -0.12
LITAFQ99732 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LITAFQ99732 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LITAFQ99732 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LITAFQ99732 AC087289.5-201ENST00000586076 3175 ntBASIC14.32□□□□□ -0.12
LITAFQ99732 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LITAFQ99732 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LITAFQ99732 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 FP325331.1-202ENST00000623531 1380 ntBASIC14.31□□□□□ -0.12
LITAFQ99732 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LITAFQ99732 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 AF131216.4-201ENST00000638924 1588 ntBASIC14.3□□□□□ -0.12
LITAFQ99732 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.3□□□□□ -0.12
LITAFQ99732 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.3□□□□□ -0.12
LITAFQ99732 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.3□□□□□ -0.12
LITAFQ99732 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.3□□□□□ -0.12
LITAFQ99732 AC104564.3-201ENST00000582367 638 ntBASIC14.3□□□□□ -0.12
LITAFQ99732 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC14.3□□□□□ -0.12
LITAFQ99732 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LITAFQ99732 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 C17orf82-201ENST00000623772 1530 ntBASIC14.3□□□□□ -0.12
LITAFQ99732 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LITAFQ99732 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 PCDHAC2-203ENST00000615316 3011 ntBASIC14.29□□□□□ -0.12
LITAFQ99732 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms