Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SLC38A3Q99624 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC38A3Q99624 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A3Q99624 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A3Q99624 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.8■□□□□ 0.92
SLC38A3Q99624 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
SLC38A3Q99624 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A3Q99624 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 AC087742.1-201ENST00000575880 1738 ntBASIC20.79■□□□□ 0.92
SLC38A3Q99624 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A3Q99624 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC38A3Q99624 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A3Q99624 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A3Q99624 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A3Q99624 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A3Q99624 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A3Q99624 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A3Q99624 AC073111.5-205ENST00000641717 521 ntBASIC20.78■□□□□ 0.92
SLC38A3Q99624 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A3Q99624 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SLC38A3Q99624 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC38A3Q99624 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLC38A3Q99624 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A3Q99624 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC38A3Q99624 AC137767.1-201ENST00000602918 1920 ntBASIC20.77■□□□□ 0.92
SLC38A3Q99624 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC38A3Q99624 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC38A3Q99624 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A3Q99624 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SLC38A3Q99624 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SLC38A3Q99624 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SLC38A3Q99624 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.77■□□□□ 0.91
SLC38A3Q99624 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC38A3Q99624 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A3Q99624 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A3Q99624 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC38A3Q99624 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC38A3Q99624 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC38A3Q99624 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A3Q99624 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A3Q99624 AC011767.1-201ENST00000617410 1153 ntBASIC20.76■□□□□ 0.91
SLC38A3Q99624 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC38A3Q99624 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SLC38A3Q99624 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A3Q99624 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC38A3Q99624 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC38A3Q99624 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC38A3Q99624 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 ID1-201ENST00000376105 1233 ntBASIC20.75■□□□□ 0.91
SLC38A3Q99624 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC38A3Q99624 CDCA4P2-201ENST00000441182 718 ntBASIC20.75■□□□□ 0.91
SLC38A3Q99624 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC38A3Q99624 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC38A3Q99624 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC38A3Q99624 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A3Q99624 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms