Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDCA3Q99618 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.6■■□□□ 1.21
CDCA3Q99618 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.6■■□□□ 1.21
CDCA3Q99618 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.6■■□□□ 1.21
CDCA3Q99618 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDCA3Q99618 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDCA3Q99618 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.6■■□□□ 1.21
CDCA3Q99618 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CDCA3Q99618 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.6■■□□□ 1.21
CDCA3Q99618 AP006294.2-201ENST00000641667 209 ntBASIC22.6■■□□□ 1.21
CDCA3Q99618 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDCA3Q99618 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.6■■□□□ 1.21
CDCA3Q99618 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDCA3Q99618 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA3Q99618 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA3Q99618 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
CDCA3Q99618 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.59■■□□□ 1.21
CDCA3Q99618 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.59■■□□□ 1.21
CDCA3Q99618 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.59■■□□□ 1.21
CDCA3Q99618 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CDCA3Q99618 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.59■■□□□ 1.21
CDCA3Q99618 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.59■■□□□ 1.21
CDCA3Q99618 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.59■■□□□ 1.21
CDCA3Q99618 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA3Q99618 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDCA3Q99618 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
CDCA3Q99618 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.58■■□□□ 1.21
CDCA3Q99618 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.58■■□□□ 1.21
CDCA3Q99618 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.58■■□□□ 1.21
CDCA3Q99618 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.58■■□□□ 1.21
CDCA3Q99618 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.58■■□□□ 1.21
CDCA3Q99618 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.58■■□□□ 1.21
CDCA3Q99618 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDCA3Q99618 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA3Q99618 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA3Q99618 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CDCA3Q99618 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA3Q99618 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.57■■□□□ 1.2
CDCA3Q99618 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
CDCA3Q99618 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.57■■□□□ 1.2
CDCA3Q99618 RARRES2P4-201ENST00000514074 484 ntBASIC22.57■■□□□ 1.2
CDCA3Q99618 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CDCA3Q99618 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.57■■□□□ 1.2
CDCA3Q99618 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA3Q99618 AC120498.10-201ENST00000621827 505 ntBASIC22.57■■□□□ 1.2
CDCA3Q99618 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDCA3Q99618 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA3Q99618 OR7E47P-201ENST00000546390 1422 ntBASIC22.57■■□□□ 1.2
CDCA3Q99618 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CDCA3Q99618 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA3Q99618 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.56■■□□□ 1.2
CDCA3Q99618 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA3Q99618 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA3Q99618 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA3Q99618 AC093787.1-201ENST00000450396 207 ntBASIC22.56■■□□□ 1.2
CDCA3Q99618 AC097658.1-201ENST00000475555 843 ntBASIC22.56■■□□□ 1.2
CDCA3Q99618 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.56■■□□□ 1.2
CDCA3Q99618 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.56■■□□□ 1.2
CDCA3Q99618 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.56■■□□□ 1.2
CDCA3Q99618 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.56■■□□□ 1.2
CDCA3Q99618 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA3Q99618 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA3Q99618 LINC01960-201ENST00000563759 1884 ntBASIC22.56■■□□□ 1.2
CDCA3Q99618 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA3Q99618 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.55■■□□□ 1.2
CDCA3Q99618 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.55■■□□□ 1.2
CDCA3Q99618 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.55■■□□□ 1.2
CDCA3Q99618 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA3Q99618 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDCA3Q99618 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA3Q99618 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA3Q99618 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA3Q99618 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA3Q99618 AC016405.3-201ENST00000607710 860 ntBASIC22.55■■□□□ 1.2
CDCA3Q99618 MYC-209ENST00000641252 345 ntBASIC22.55■■□□□ 1.2
CDCA3Q99618 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.55■■□□□ 1.2
CDCA3Q99618 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA3Q99618 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA3Q99618 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.54■■□□□ 1.2
CDCA3Q99618 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA3Q99618 BX276092.2-201ENST00000417668 665 ntBASIC22.54■■□□□ 1.2
CDCA3Q99618 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDCA3Q99618 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.54■■□□□ 1.2
CDCA3Q99618 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA3Q99618 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CDCA3Q99618 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.54■■□□□ 1.2
CDCA3Q99618 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA3Q99618 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA3Q99618 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CDCA3Q99618 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.53■■□□□ 1.2
CDCA3Q99618 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CDCA3Q99618 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA3Q99618 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CDCA3Q99618 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA3Q99618 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CDCA3Q99618 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA3Q99618 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.53■■□□□ 1.2
CDCA3Q99618 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA3Q99618 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CDCA3Q99618 DUSP5P2-201ENST00000426873 1033 ntBASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms