Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV9Q99603 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV9Q99603 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRGV9Q99603 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV9Q99603 FEM1AP4-201ENST00000443167 1987 ntBASIC16.73■□□□□ 0.27
TRGV9Q99603 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV9Q99603 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRGV9Q99603 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV9Q99603 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV9Q99603 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV9Q99603 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRGV9Q99603 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV9Q99603 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV9Q99603 AC092171.4-201ENST00000609130 632 ntBASIC16.72■□□□□ 0.27
TRGV9Q99603 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV9Q99603 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV9Q99603 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV9Q99603 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV9Q99603 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV9Q99603 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
TRGV9Q99603 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV9Q99603 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV9Q99603 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.71■□□□□ 0.27
TRGV9Q99603 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.71■□□□□ 0.27
TRGV9Q99603 MIR3181-201ENST00000578512 73 ntBASIC16.71■□□□□ 0.27
TRGV9Q99603 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV9Q99603 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV9Q99603 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV9Q99603 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV9Q99603 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV9Q99603 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 AC026471.6-201ENST00000622954 1905 ntBASIC16.7■□□□□ 0.26
TRGV9Q99603 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRGV9Q99603 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV9Q99603 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 AC010141.3-201ENST00000456659 717 ntBASIC16.7■□□□□ 0.26
TRGV9Q99603 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.7■□□□□ 0.26
TRGV9Q99603 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV9Q99603 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRGV9Q99603 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRGV9Q99603 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV9Q99603 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV9Q99603 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV9Q99603 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV9Q99603 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.69■□□□□ 0.26
TRGV9Q99603 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV9Q99603 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV9Q99603 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
TRGV9Q99603 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV9Q99603 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.69■□□□□ 0.26
TRGV9Q99603 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TRGV9Q99603 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TRGV9Q99603 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRGV9Q99603 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRGV9Q99603 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV9Q99603 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.68■□□□□ 0.26
TRGV9Q99603 AL034346.1-201ENST00000568244 1277 ntBASIC16.68■□□□□ 0.26
TRGV9Q99603 MIR3621-201ENST00000580529 85 ntBASIC16.68■□□□□ 0.26
TRGV9Q99603 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV9Q99603 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRGV9Q99603 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV9Q99603 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.67■□□□□ 0.26
TRGV9Q99603 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRGV9Q99603 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRGV9Q99603 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV9Q99603 OXCT2P1-201ENST00000447263 1535 ntBASIC16.67■□□□□ 0.26
TRGV9Q99603 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRGV9Q99603 SRD5A1P1-201ENST00000442297 786 ntBASIC16.67■□□□□ 0.26
TRGV9Q99603 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms