Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 SER3YER081W 1410 nt2.59□□□□□ -1.99
ATG40Q99325 SMI1YGR229C 1518 nt2.59□□□□□ -1.99
ATG40Q99325 MDM1YML104C 3384 nt2.59□□□□□ -1.99
ATG40Q99325 PAU10YDR542W 363 nt2.59□□□□□ -1.99
ATG40Q99325 PAU11YGL261C 363 nt2.59□□□□□ -1.99
ATG40Q99325 PAU13YHL046C 363 nt2.59□□□□□ -1.99
ATG40Q99325 THP2YHR167W 786 nt2.59□□□□□ -1.99
ATG40Q99325 PAU4YLR461W 363 nt2.59□□□□□ -1.99
ATG40Q99325 CSM3YMR048W 954 nt2.59□□□□□ -1.99
ATG40Q99325 YBL077WYBL077W 432 nt2.59□□□□□ -1.99
ATG40Q99325 CPA2YJR109C 3357 nt2.59□□□□□ -2
ATG40Q99325 RGC1YPR115W 3252 nt2.59□□□□□ -2
ATG40Q99325 YHL012WYHL012W 1482 nt2.58□□□□□ -2
ATG40Q99325 DTD1YDL219W 453 nt2.58□□□□□ -2
ATG40Q99325 RTN1YDR233C 888 nt2.58□□□□□ -2
ATG40Q99325 POG1YIL122W 1056 nt2.58□□□□□ -2
ATG40Q99325 RPN13YLR421C 471 nt2.58□□□□□ -2
ATG40Q99325 SEC14YMR079W 915 nt2.58□□□□□ -2
ATG40Q99325 MCM16YPR046W 546 nt2.58□□□□□ -2
ATG40Q99325 DSN1YIR010W 1731 nt2.58□□□□□ -2
ATG40Q99325 YBR238CYBR238C 2196 nt2.58□□□□□ -2
ATG40Q99325 COM2YER130C 1332 nt2.58□□□□□ -2
ATG40Q99325 JJJ1YNL227C 1773 nt2.58□□□□□ -2
ATG40Q99325 YTA7YGR270W 4140 nt2.58□□□□□ -2
ATG40Q99325 SET1YHR119W 3243 nt2.58□□□□□ -2
ATG40Q99325 MOT1YPL082C 5604 nt2.58□□□□□ -2
ATG40Q99325 XRN1YGL173C 4587 nt2.58□□□□□ -2
ATG40Q99325 DYN2YDR424C 279 nt2.57□□□□□ -2
ATG40Q99325 tQ(UUG)BtQ(UUG)B 72 nt2.57□□□□□ -2
ATG40Q99325 YJR111CYJR111C 852 nt2.57□□□□□ -2
ATG40Q99325 AHP1YLR109W 531 nt2.57□□□□□ -2
ATG40Q99325 BUD21YOR078W 645 nt2.57□□□□□ -2
ATG40Q99325 TAF14YPL129W 735 nt2.57□□□□□ -2
ATG40Q99325 POL31YJR006W 1464 nt2.57□□□□□ -2
ATG40Q99325 MIX14YDR031W 366 nt2.56□□□□□ -2
ATG40Q99325 MMS21YEL019C 804 nt2.56□□□□□ -2
ATG40Q99325 LST7YGR057C 729 nt2.56□□□□□ -2
ATG40Q99325 ARD1YHR013C 717 nt2.56□□□□□ -2
ATG40Q99325 SFH5YJL145W 885 nt2.56□□□□□ -2
ATG40Q99325 ATP12YJL180C 978 nt2.56□□□□□ -2
ATG40Q99325 MAK16YAL025C 921 nt2.56□□□□□ -2
ATG40Q99325 MTR2YKL186C 555 nt2.56□□□□□ -2
ATG40Q99325 YBL039W-BYBL039W-B 180 nt2.56□□□□□ -2
ATG40Q99325 ERG2YMR202W 669 nt2.56□□□□□ -2
ATG40Q99325 YOR073W-AYOR073W-A 234 nt2.56□□□□□ -2
ATG40Q99325 YPR077CYPR077C 372 nt2.56□□□□□ -2
ATG40Q99325 VPS17YOR132W 1656 nt2.56□□□□□ -2
ATG40Q99325 CDH1YGL003C 1701 nt2.56□□□□□ -2
ATG40Q99325 YDL242WYDL242W 354 nt2.55□□□□□ -2
ATG40Q99325 RPC11YDR045C 333 nt2.55□□□□□ -2
ATG40Q99325 YDR149CYDR149C 708 nt2.55□□□□□ -2
ATG40Q99325 YEL032C-AYEL032C-A 162 nt2.55□□□□□ -2
ATG40Q99325 ITC1YGL133W 3795 nt2.55□□□□□ -2
ATG40Q99325 SLH1YGR271W 5904 nt2.55□□□□□ -2
ATG40Q99325 YHL005CYHL005C 393 nt2.55□□□□□ -2
ATG40Q99325 YJL175WYJL175W 513 nt2.55□□□□□ -2
ATG40Q99325 YUH1YJR099W 711 nt2.55□□□□□ -2
ATG40Q99325 SDH3YKL141W 597 nt2.55□□□□□ -2
ATG40Q99325 GMH1YKR030W 822 nt2.55□□□□□ -2
ATG40Q99325 RPL6AYML073C 531 nt2.55□□□□□ -2
ATG40Q99325 PRM15YMR278W 1869 nt2.55□□□□□ -2
ATG40Q99325 NDJ1YOL104C 1059 nt2.55□□□□□ -2
ATG40Q99325 RPL20BYOR312C 519 nt2.55□□□□□ -2
ATG40Q99325 MIC60YKR016W 1623 nt2.54□□□□□ -2
ATG40Q99325 LSM6YDR378C 261 nt2.54□□□□□ -2
ATG40Q99325 YHP1YDR451C 1062 nt2.54□□□□□ -2
ATG40Q99325 SFH1YLR321C 1281 nt2.54□□□□□ -2
ATG40Q99325 DSE3YOR264W 1293 nt2.54□□□□□ -2
ATG40Q99325 FES1YBR101C 873 nt2.54□□□□□ -2
ATG40Q99325 DAP2YHR028C 2457 nt2.54□□□□□ -2
ATG40Q99325 TSC11YER093C 4293 nt2.54□□□□□ -2
ATG40Q99325 ROM1YGR070W 3468 nt2.54□□□□□ -2
ATG40Q99325 CEX1YOR112W 2286 nt2.53□□□□□ -2
ATG40Q99325 PCL9YDL179W 915 nt2.53□□□□□ -2
ATG40Q99325 TOS8YGL096W 831 nt2.53□□□□□ -2
ATG40Q99325 PPX1YHR201C 1194 nt2.53□□□□□ -2
ATG40Q99325 ARC15YIL062C 465 nt2.53□□□□□ -2
ATG40Q99325 MFA2YNL145W 117 nt2.53□□□□□ -2
ATG40Q99325 YOL050CYOL050C 321 nt2.53□□□□□ -2
ATG40Q99325 OXR1YPL196W 822 nt2.53□□□□□ -2
ATG40Q99325 USV1YPL230W 1176 nt2.53□□□□□ -2
ATG40Q99325 TMA108YIL137C 2841 nt2.53□□□□□ -2
ATG40Q99325 ECM29YHL030W 5607 nt2.53□□□□□ -2
ATG40Q99325 IMH1YLR309C 2736 nt2.53□□□□□ -2
ATG40Q99325 SDS23YGL056C 1584 nt2.53□□□□□ -2.01
ATG40Q99325 YVC1YOR087W 2028 nt2.52□□□□□ -2.01
ATG40Q99325 EPL1YFL024C 2499 nt2.52□□□□□ -2.01
ATG40Q99325 CAF130YGR134W 3369 nt2.52□□□□□ -2.01
ATG40Q99325 YDR098C-BYDR098C-B 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YDR210C-DYDR210C-D 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YDR316W-BYDR316W-B 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YDR365W-BYDR365W-B 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YER138CYER138C 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YER160CYER160C 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YGR038C-BYGR038C-B 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YGR161C-DYGR161C-D 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YJR027WYJR027W 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YLR157C-BYLR157C-B 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YML039WYML039W 5268 nt2.52□□□□□ -2.01
ATG40Q99325 YML045WYML045W 5268 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms