Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS50Q96JG6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS50Q96JG6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VPS50Q96JG6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS50Q96JG6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS50Q96JG6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS50Q96JG6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VPS50Q96JG6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VPS50Q96JG6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS50Q96JG6 AC079630.1-202ENST00000618127 1840 ntBASIC20.85■□□□□ 0.93
VPS50Q96JG6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS50Q96JG6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS50Q96JG6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
VPS50Q96JG6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS50Q96JG6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VPS50Q96JG6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS50Q96JG6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.85■□□□□ 0.93
VPS50Q96JG6 AL499627.2-201ENST00000606283 725 ntBASIC20.85■□□□□ 0.93
VPS50Q96JG6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS50Q96JG6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS50Q96JG6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS50Q96JG6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS50Q96JG6 LINC01529-204ENST00000636474 1715 ntBASIC20.84■□□□□ 0.93
VPS50Q96JG6 AC133637.1-201ENST00000624115 1537 ntBASIC20.84■□□□□ 0.93
VPS50Q96JG6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS50Q96JG6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VPS50Q96JG6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS50Q96JG6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS50Q96JG6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS50Q96JG6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS50Q96JG6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS50Q96JG6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
VPS50Q96JG6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS50Q96JG6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS50Q96JG6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS50Q96JG6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS50Q96JG6 AC144652.1-201ENST00000609974 1624 ntBASIC20.84■□□□□ 0.93
VPS50Q96JG6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS50Q96JG6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS50Q96JG6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS50Q96JG6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS50Q96JG6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
VPS50Q96JG6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS50Q96JG6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS50Q96JG6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
VPS50Q96JG6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
VPS50Q96JG6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.83■□□□□ 0.92
VPS50Q96JG6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.83■□□□□ 0.92
VPS50Q96JG6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.83■□□□□ 0.92
VPS50Q96JG6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.83■□□□□ 0.92
VPS50Q96JG6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VPS50Q96JG6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
VPS50Q96JG6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
VPS50Q96JG6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS50Q96JG6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
VPS50Q96JG6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS50Q96JG6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS50Q96JG6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS50Q96JG6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS50Q96JG6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VPS50Q96JG6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS50Q96JG6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.82■□□□□ 0.92
VPS50Q96JG6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS50Q96JG6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VPS50Q96JG6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VPS50Q96JG6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS50Q96JG6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS50Q96JG6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.8■□□□□ 0.92
VPS50Q96JG6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS50Q96JG6 AC092667.1-201ENST00000434301 2586 ntBASIC20.8■□□□□ 0.92
VPS50Q96JG6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VPS50Q96JG6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS50Q96JG6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS50Q96JG6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms