Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 SLC25A24-204ENST00000569674 2357 ntBASIC22.49■■□□□ 1.19
RNF25Q96BH1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF25Q96BH1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RNF25Q96BH1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF25Q96BH1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF25Q96BH1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RNF25Q96BH1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF25Q96BH1 AC068587.7-201ENST00000641602 218 ntBASIC22.49■■□□□ 1.19
RNF25Q96BH1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RNF25Q96BH1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF25Q96BH1 OR7E47P-201ENST00000546390 1422 ntBASIC22.48■■□□□ 1.19
RNF25Q96BH1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF25Q96BH1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF25Q96BH1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF25Q96BH1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF25Q96BH1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RNF25Q96BH1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF25Q96BH1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
RNF25Q96BH1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF25Q96BH1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
RNF25Q96BH1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF25Q96BH1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF25Q96BH1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF25Q96BH1 AC026471.6-201ENST00000622954 1905 ntBASIC22.47■■□□□ 1.19
RNF25Q96BH1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF25Q96BH1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF25Q96BH1 DUX4L19-201ENST00000557448 1267 ntBASIC22.47■■□□□ 1.19
RNF25Q96BH1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF25Q96BH1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF25Q96BH1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF25Q96BH1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF25Q96BH1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF25Q96BH1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF25Q96BH1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF25Q96BH1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF25Q96BH1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RNF25Q96BH1 AL138724.1-201ENST00000606771 1088 ntBASIC22.46■■□□□ 1.19
RNF25Q96BH1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
RNF25Q96BH1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
RNF25Q96BH1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF25Q96BH1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF25Q96BH1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF25Q96BH1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RNF25Q96BH1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RNF25Q96BH1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RNF25Q96BH1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 AC010141.3-201ENST00000456659 717 ntBASIC22.45■■□□□ 1.18
RNF25Q96BH1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 AC087239.1-201ENST00000622671 572 ntBASIC22.45■■□□□ 1.18
RNF25Q96BH1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RNF25Q96BH1 AC005229.4-201ENST00000610085 2198 ntBASIC22.45■■□□□ 1.18
RNF25Q96BH1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF25Q96BH1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF25Q96BH1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF25Q96BH1 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.44■■□□□ 1.18
RNF25Q96BH1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF25Q96BH1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms