Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 AF213884.3-201ENST00000563833 479 ntBASIC20.65■□□□□ 0.9
UBE2E3Q969T4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2E3Q969T4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.65■□□□□ 0.9
UBE2E3Q969T4 AP004607.7-201ENST00000527152 1677 ntBASIC20.64■□□□□ 0.9
UBE2E3Q969T4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBE2E3Q969T4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2E3Q969T4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 TSPY26P-201ENST00000476365 1326 ntBASIC20.63■□□□□ 0.89
UBE2E3Q969T4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2E3Q969T4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 SMUG1P1-201ENST00000590640 811 ntBASIC20.62■□□□□ 0.89
UBE2E3Q969T4 AL031432.3-201ENST00000607698 485 ntBASIC20.62■□□□□ 0.89
UBE2E3Q969T4 AL136967.2-201ENST00000623968 743 ntBASIC20.62■□□□□ 0.89
UBE2E3Q969T4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2E3Q969T4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.61■□□□□ 0.89
UBE2E3Q969T4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.6■□□□□ 0.89
UBE2E3Q969T4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 SUDS3P1-201ENST00000505831 966 ntBASIC20.6■□□□□ 0.89
UBE2E3Q969T4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms