Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RAPGEF4Q8WZA2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.37■■■□□ 2.13
RAPGEF4Q8WZA2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 LINC00526-201ENST00000581067 1875 ntBASIC28.36■■■□□ 2.13
RAPGEF4Q8WZA2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 AC133041.1-202ENST00000642053 222 ntBASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RAPGEF4Q8WZA2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 AC013268.1-206ENST00000638368 961 ntBASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 AC112229.1-201ENST00000639295 961 ntBASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
RAPGEF4Q8WZA2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RAPGEF4Q8WZA2 EEF1DP3-203ENST00000566025 782 ntBASIC28.33■■■□□ 2.13
RAPGEF4Q8WZA2 SLC7A5P1-201ENST00000568957 537 ntBASIC28.33■■■□□ 2.13
RAPGEF4Q8WZA2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.33■■■□□ 2.13
RAPGEF4Q8WZA2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RAPGEF4Q8WZA2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
RAPGEF4Q8WZA2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
RAPGEF4Q8WZA2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 AC073210.2-201ENST00000430369 194 ntBASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 UQCRFS1P1-201ENST00000435169 820 ntBASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
RAPGEF4Q8WZA2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 TERF1P5-201ENST00000477545 1207 ntBASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 AC098934.4-201ENST00000564127 592 ntBASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 MIR4651-201ENST00000582622 73 ntBASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RAPGEF4Q8WZA2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 AP006587.3-201ENST00000525742 1516 ntBASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 AC053503.5-201ENST00000601508 636 ntBASIC28.3■■■□□ 2.12
RAPGEF4Q8WZA2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.29■■■□□ 2.12
RAPGEF4Q8WZA2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF4Q8WZA2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF4Q8WZA2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.28■■■□□ 2.12
RAPGEF4Q8WZA2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RAPGEF4Q8WZA2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
RAPGEF4Q8WZA2 AC068338.2-201ENST00000563278 1430 ntBASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms