Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CKAP2Q8WWK9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CKAP2Q8WWK9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CKAP2Q8WWK9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.33■■□□□ 1.01
CKAP2Q8WWK9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CKAP2Q8WWK9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CKAP2Q8WWK9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.33■■□□□ 1.01
CKAP2Q8WWK9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CKAP2Q8WWK9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CKAP2Q8WWK9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CKAP2Q8WWK9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.32■■□□□ 1
CKAP2Q8WWK9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CKAP2Q8WWK9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CKAP2Q8WWK9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.32■■□□□ 1
CKAP2Q8WWK9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
CKAP2Q8WWK9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CKAP2Q8WWK9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CKAP2Q8WWK9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
CKAP2Q8WWK9 ABHD17AP5-201ENST00000580133 923 ntBASIC21.32■■□□□ 1
CKAP2Q8WWK9 C17orf82-201ENST00000623772 1530 ntBASIC21.32■■□□□ 1
CKAP2Q8WWK9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CKAP2Q8WWK9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.32■■□□□ 1
CKAP2Q8WWK9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CKAP2Q8WWK9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.31■■□□□ 1
CKAP2Q8WWK9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.31■■□□□ 1
CKAP2Q8WWK9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.31■■□□□ 1
CKAP2Q8WWK9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.31■■□□□ 1
CKAP2Q8WWK9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.31■■□□□ 1
CKAP2Q8WWK9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CKAP2Q8WWK9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.31■■□□□ 1
CKAP2Q8WWK9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 AC005703.6-201ENST00000623265 1329 ntBASIC21.3■■□□□ 1
CKAP2Q8WWK9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.3■■□□□ 1
CKAP2Q8WWK9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.3■■□□□ 1
CKAP2Q8WWK9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CKAP2Q8WWK9 RNF165-205ENST00000588679 2904 ntBASIC21.29■■□□□ 1
CKAP2Q8WWK9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CKAP2Q8WWK9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CKAP2Q8WWK9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.29■■□□□ 1
CKAP2Q8WWK9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CKAP2Q8WWK9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.29■■□□□ 1
CKAP2Q8WWK9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.29■■□□□ 1
CKAP2Q8WWK9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.29■■□□□ 1
CKAP2Q8WWK9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CKAP2Q8WWK9 AL049796.1-201ENST00000565336 1766 ntBASIC21.28■■□□□ 1
CKAP2Q8WWK9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CKAP2Q8WWK9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CKAP2Q8WWK9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 DUX4L18-201ENST00000553347 1267 ntBASIC21.28■■□□□ 1
CKAP2Q8WWK9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 PVT1_1.1-201ENST00000615125 194 ntBASIC21.28■■□□□ 1
CKAP2Q8WWK9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CKAP2Q8WWK9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.28■■□□□ 1
CKAP2Q8WWK9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.28■■□□□ 1
CKAP2Q8WWK9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CKAP2Q8WWK9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.27■■□□□ 1
CKAP2Q8WWK9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CKAP2Q8WWK9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CKAP2Q8WWK9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CKAP2Q8WWK9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CKAP2Q8WWK9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CKAP2Q8WWK9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CKAP2Q8WWK9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
CKAP2Q8WWK9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.27■■□□□ 1
CKAP2Q8WWK9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms