Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 NTF6A-201ENST00000591175 560 ntBASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 AC004687.1-201ENST00000579003 1625 ntBASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRUB1Q8WWH5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 AC137630.3-201ENST00000607245 391 ntBASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 FEM1AP4-201ENST00000443167 1987 ntBASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB1Q8WWH5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 AC010980.1-201ENST00000587192 1142 ntBASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 HSD17B1P1-201ENST00000590052 955 ntBASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.59■□□□□ 0.73
TRUB1Q8WWH5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.58■□□□□ 0.73
TRUB1Q8WWH5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRUB1Q8WWH5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.58■□□□□ 0.73
TRUB1Q8WWH5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.58■□□□□ 0.73
TRUB1Q8WWH5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 ATP5G2P3-201ENST00000429083 425 ntBASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 LINC01006-201ENST00000333319 2292 ntBASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB1Q8WWH5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms