Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.73■■□□□ 1.07
PTCD2Q8WV60 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD2Q8WV60 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 AC010542.4-201ENST00000563151 1910 ntBASIC21.72■■□□□ 1.07
PTCD2Q8WV60 FBXW4P1-201ENST00000426721 2239 ntBASIC21.72■■□□□ 1.07
PTCD2Q8WV60 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCD2Q8WV60 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCD2Q8WV60 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD2Q8WV60 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.7■■□□□ 1.06
PTCD2Q8WV60 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD2Q8WV60 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PTCD2Q8WV60 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCD2Q8WV60 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCD2Q8WV60 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PTCD2Q8WV60 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 AC087623.3-201ENST00000607047 1098 ntBASIC21.69■■□□□ 1.06
PTCD2Q8WV60 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCD2Q8WV60 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 MIR6084-201ENST00000622012 110 ntBASIC21.68■■□□□ 1.06
PTCD2Q8WV60 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
PTCD2Q8WV60 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms