Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 AC027612.3-201ENST00000413684 1047 ntBASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.98■■□□□ 1.11
SHROOM3Q8TF72 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SHROOM3Q8TF72 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 AP006587.3-201ENST00000525742 1516 ntBASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 FBXW4P1-201ENST00000426721 2239 ntBASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM3Q8TF72 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.95■■□□□ 1.11
SHROOM3Q8TF72 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.95■■□□□ 1.11
SHROOM3Q8TF72 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SHROOM3Q8TF72 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM3Q8TF72 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 TPRG1LP1-201ENST00000598702 760 ntBASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM3Q8TF72 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 AC005224.4-201ENST00000583262 1652 ntBASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.93■■□□□ 1.1
SHROOM3Q8TF72 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 IRS3P-201ENST00000223076 1006 ntBASIC21.92■■□□□ 1.1
SHROOM3Q8TF72 ID1-201ENST00000376105 1233 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms