Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 AC011767.1-201ENST00000617410 1153 ntBASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 KRT87P-202ENST00000534226 1464 ntBASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 KRT18P11-201ENST00000435214 1283 ntBASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 CROCCP5-201ENST00000436658 830 ntBASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHKBP1Q8TBC3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 AC104187.1-201ENST00000607510 612 ntBASIC22.58■■□□□ 1.21
SHKBP1Q8TBC3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHKBP1Q8TBC3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHKBP1Q8TBC3 LINC01960-201ENST00000563759 1884 ntBASIC22.58■■□□□ 1.2
SHKBP1Q8TBC3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.57■■□□□ 1.2
SHKBP1Q8TBC3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 AC006970.2-201ENST00000450065 779 ntBASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 AC079089.2-201ENST00000531211 1277 ntBASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.56■■□□□ 1.2
SHKBP1Q8TBC3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHKBP1Q8TBC3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 MFSD11-216ENST00000590393 1141 ntBASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 AC104771.1-201ENST00000603335 964 ntBASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHKBP1Q8TBC3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms