Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC2Q8TAQ2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.19■■□□□ 1.62
SMARCC2Q8TAQ2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 AC010141.3-201ENST00000456659 717 ntBASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.18■■□□□ 1.62
SMARCC2Q8TAQ2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.17■■□□□ 1.62
SMARCC2Q8TAQ2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 OR7E47P-201ENST00000546390 1422 ntBASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC2Q8TAQ2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC2Q8TAQ2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC2Q8TAQ2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC2Q8TAQ2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
SMARCC2Q8TAQ2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC2Q8TAQ2 OXCT2P1-201ENST00000447263 1535 ntBASIC25.14■■□□□ 1.62
SMARCC2Q8TAQ2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMARCC2Q8TAQ2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.14■■□□□ 1.62
SMARCC2Q8TAQ2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SMARCC2Q8TAQ2 AC026471.6-201ENST00000622954 1905 ntBASIC25.14■■□□□ 1.61
SMARCC2Q8TAQ2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
SMARCC2Q8TAQ2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
SMARCC2Q8TAQ2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 MIR572-201ENST00000384983 95 ntBASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 RARRES2P6-201ENST00000567333 442 ntBASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCC2Q8TAQ2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 AC087239.1-201ENST00000622671 572 ntBASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SMARCC2Q8TAQ2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCC2Q8TAQ2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms