Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 TERF1P5-201ENST00000477545 1207 ntBASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNIP1Q8TAD8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 AL512625.2-201ENST00000417533 625 ntBASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 RPS2P4-201ENST00000476944 856 ntBASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 AC055733.4-201ENST00000638462 1354 ntBASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 AC079630.1-202ENST00000618127 1840 ntBASIC20.29■□□□□ 0.84
SNIP1Q8TAD8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNIP1Q8TAD8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 AC083880.1-201ENST00000608266 535 ntBASIC20.27■□□□□ 0.84
SNIP1Q8TAD8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNIP1Q8TAD8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.27■□□□□ 0.83
SNIP1Q8TAD8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 AL158047.1-201ENST00000445918 881 ntBASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 AC142381.4-202ENST00000563973 229 ntBASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 AC008694.1-202ENST00000636953 945 ntBASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 MYC-209ENST00000641252 345 ntBASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNIP1Q8TAD8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 AC069236.1-201ENST00000604339 616 ntBASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SNIP1Q8TAD8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNIP1Q8TAD8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNIP1Q8TAD8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNIP1Q8TAD8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNIP1Q8TAD8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
SNIP1Q8TAD8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.24■□□□□ 0.83
SNIP1Q8TAD8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms