Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC133637.1-201ENST00000624115 1537 ntBASIC19.29■□□□□ 0.68
BBS1Q8NFJ9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BBS1Q8NFJ9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.29■□□□□ 0.68
BBS1Q8NFJ9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BBS1Q8NFJ9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BBS1Q8NFJ9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.29■□□□□ 0.68
BBS1Q8NFJ9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BBS1Q8NFJ9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 AC009299.2-201ENST00000482477 511 ntBASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BBS1Q8NFJ9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 AL157384.1-201ENST00000445995 2473 ntBASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 UNC93B8-201ENST00000511903 705 ntBASIC19.27■□□□□ 0.68
BBS1Q8NFJ9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.27■□□□□ 0.67
BBS1Q8NFJ9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 pRNA.6-201ENST00000610482 90 ntBASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 pRNA.5-201ENST00000612139 90 ntBASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 pRNA.11-201ENST00000618423 90 ntBASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 pRNA.13-201ENST00000619112 90 ntBASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BBS1Q8NFJ9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 MIR6724-1-201ENST00000616420 92 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 MIR6724-2-201ENST00000616483 92 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 MIR6724-4-201ENST00000617390 92 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 MIR6724-3-201ENST00000622482 92 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 AC241377.3-202ENST00000626088 1088 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 AC241585.3-202ENST00000628937 1088 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 AC245100.8-202ENST00000629247 1058 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 OR7E47P-201ENST00000546390 1422 ntBASIC19.25■□□□□ 0.67
BBS1Q8NFJ9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
BBS1Q8NFJ9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.23■□□□□ 0.67
BBS1Q8NFJ9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms