Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CPEB3Q8NE35 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 C11orf96-202ENST00000528572 1834 ntBASIC18.77■□□□□ 0.6
CPEB3Q8NE35 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.77■□□□□ 0.6
CPEB3Q8NE35 AC105233.4-201ENST00000642045 216 ntBASIC18.77■□□□□ 0.6
CPEB3Q8NE35 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPEB3Q8NE35 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPEB3Q8NE35 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CPEB3Q8NE35 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CPEB3Q8NE35 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.77■□□□□ 0.59
CPEB3Q8NE35 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
CPEB3Q8NE35 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPEB3Q8NE35 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 AP004607.7-201ENST00000527152 1677 ntBASIC18.74■□□□□ 0.59
CPEB3Q8NE35 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CPEB3Q8NE35 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 IRS3P-201ENST00000223076 1006 ntBASIC18.73■□□□□ 0.59
CPEB3Q8NE35 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 FAM99A-202ENST00000538190 1989 ntBASIC18.73■□□□□ 0.59
CPEB3Q8NE35 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.73■□□□□ 0.59
CPEB3Q8NE35 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms