Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
CFAP43Q8NDM7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC33.92■■■■□ 3.02
CFAP43Q8NDM7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC33.92■■■■□ 3.02
CFAP43Q8NDM7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC33.92■■■■□ 3.02
CFAP43Q8NDM7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
CFAP43Q8NDM7 KRT18P29-201ENST00000397031 1267 ntBASIC33.91■■■■□ 3.02
CFAP43Q8NDM7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
CFAP43Q8NDM7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC33.9■■■■□ 3.02
CFAP43Q8NDM7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC33.9■■■■□ 3.02
CFAP43Q8NDM7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC33.9■■■■□ 3.02
CFAP43Q8NDM7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC33.9■■■■□ 3.02
CFAP43Q8NDM7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC33.89■■■■□ 3.02
CFAP43Q8NDM7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
CFAP43Q8NDM7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC33.89■■■■□ 3.02
CFAP43Q8NDM7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
CFAP43Q8NDM7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CFAP43Q8NDM7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CFAP43Q8NDM7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CFAP43Q8NDM7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC33.88■■■■□ 3.01
CFAP43Q8NDM7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CFAP43Q8NDM7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
CFAP43Q8NDM7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 CYP2T1P-201ENST00000432607 1285 ntBASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 RARRES2P4-201ENST00000514074 484 ntBASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 MARS-234ENST00000630571 216 ntTSL 5 BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 MARS-235ENST00000630803 183 ntTSL 3 BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
CFAP43Q8NDM7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 AC105036.2-201ENST00000569468 176 ntBASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC33.86■■■■□ 3.01
CFAP43Q8NDM7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC33.85■■■■□ 3.01
CFAP43Q8NDM7 GCSHP5-201ENST00000443090 522 ntBASIC33.85■■■■□ 3.01
CFAP43Q8NDM7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.85■■■■□ 3.01
CFAP43Q8NDM7 NFE2L3P1-201ENST00000588207 1959 ntBASIC33.85■■■■□ 3.01
CFAP43Q8NDM7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
CFAP43Q8NDM7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC33.84■■■■□ 3.01
CFAP43Q8NDM7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CFAP43Q8NDM7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC33.82■■■■□ 3
CFAP43Q8NDM7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CFAP43Q8NDM7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CFAP43Q8NDM7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC33.82■■■■□ 3
CFAP43Q8NDM7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CFAP43Q8NDM7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CFAP43Q8NDM7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC33.81■■■■□ 3
CFAP43Q8NDM7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC33.81■■■■□ 3
CFAP43Q8NDM7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC33.81■■■■□ 3
CFAP43Q8NDM7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CFAP43Q8NDM7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CFAP43Q8NDM7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
CFAP43Q8NDM7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CFAP43Q8NDM7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC33.8■■■■□ 3
CFAP43Q8NDM7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
CFAP43Q8NDM7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CFAP43Q8NDM7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC33.79■■■■□ 3
CFAP43Q8NDM7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC33.79■■■■□ 3
CFAP43Q8NDM7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC33.79■■■■□ 3
CFAP43Q8NDM7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC33.79■■■■□ 3
CFAP43Q8NDM7 DUSP8P5-201ENST00000422884 1815 ntBASIC33.79■■■■□ 3
CFAP43Q8NDM7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC33.79■■■■□ 3
CFAP43Q8NDM7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC33.79■■■■□ 3
CFAP43Q8NDM7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC33.79■■■■□ 3
CFAP43Q8NDM7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
CFAP43Q8NDM7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC33.78■■■■□ 3
CFAP43Q8NDM7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 AC010536.3-201ENST00000620306 533 ntBASIC33.78■■■■□ 3
CFAP43Q8NDM7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC33.78■■■■□ 3
CFAP43Q8NDM7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.78■■■■□ 3
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms