Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HMCN2Q8NDA2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 KRT18P56-201ENST00000507275 550 ntBASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 AL355075.4-201ENST00000554988 638 ntBASIC12.26□□□□□ -0.45
HMCN2Q8NDA2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 AC069236.1-201ENST00000604339 616 ntBASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HMCN2Q8NDA2 AL161729.1-201ENST00000604104 1402 ntBASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 KRT18P57-201ENST00000443599 1254 ntBASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 MIR6786-201ENST00000616843 113 ntBASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 AC009237.3-201ENST00000393279 1427 ntBASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 SOX15-203ENST00000570788 1093 ntBASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.24□□□□□ -0.45
HMCN2Q8NDA2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 AC069544.1-201ENST00000609399 999 ntBASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 TERF1P1-201ENST00000311003 1181 ntBASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HMCN2Q8NDA2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms