Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C3orf56Q8N813 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 AC010141.2-201ENST00000452426 721 ntBASIC16.81■□□□□ 0.28
C3orf56Q8N813 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 AP003733.4-201ENST00000623785 1697 ntBASIC16.81■□□□□ 0.28
C3orf56Q8N813 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C3orf56Q8N813 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C3orf56Q8N813 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 AC068338.2-201ENST00000563278 1430 ntBASIC16.8■□□□□ 0.28
C3orf56Q8N813 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C3orf56Q8N813 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C3orf56Q8N813 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
C3orf56Q8N813 AC128676.1-201ENST00000454392 318 ntBASIC16.8■□□□□ 0.28
C3orf56Q8N813 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C3orf56Q8N813 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.8■□□□□ 0.28
C3orf56Q8N813 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C3orf56Q8N813 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C3orf56Q8N813 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C3orf56Q8N813 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C3orf56Q8N813 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C3orf56Q8N813 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C3orf56Q8N813 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C3orf56Q8N813 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.79■□□□□ 0.28
C3orf56Q8N813 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.79■□□□□ 0.28
C3orf56Q8N813 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.79■□□□□ 0.28
C3orf56Q8N813 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.79■□□□□ 0.28
C3orf56Q8N813 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.79■□□□□ 0.28
C3orf56Q8N813 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C3orf56Q8N813 AC145676.1-201ENST00000514988 2004 ntBASIC16.79■□□□□ 0.28
C3orf56Q8N813 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 AL512625.2-201ENST00000417533 625 ntBASIC16.78■□□□□ 0.28
C3orf56Q8N813 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 AC138907.5-202ENST00000569484 235 ntBASIC16.78■□□□□ 0.28
C3orf56Q8N813 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.78■□□□□ 0.28
C3orf56Q8N813 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.78■□□□□ 0.28
C3orf56Q8N813 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C3orf56Q8N813 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.77■□□□□ 0.28
C3orf56Q8N813 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.77■□□□□ 0.28
C3orf56Q8N813 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.77■□□□□ 0.28
C3orf56Q8N813 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.77■□□□□ 0.28
C3orf56Q8N813 AC016405.3-201ENST00000607710 860 ntBASIC16.77■□□□□ 0.28
C3orf56Q8N813 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C3orf56Q8N813 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
C3orf56Q8N813 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
C3orf56Q8N813 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.77■□□□□ 0.27
C3orf56Q8N813 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
C3orf56Q8N813 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms