Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 AL031602.1-201ENST00000633169 911 ntBASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 Z98882.1-201ENST00000622160 2253 ntBASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNYL1Q8N7R7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 KRT16P3-201ENST00000439127 1283 ntBASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 AC079089.2-201ENST00000531211 1277 ntBASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.14■□□□□ 0.97
CCNYL1Q8N7R7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNYL1Q8N7R7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 AC099791.2-201ENST00000605725 427 ntBASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNYL1Q8N7R7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 AC026471.6-201ENST00000622954 1905 ntBASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 OR7E47P-201ENST00000546390 1422 ntBASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCNYL1Q8N7R7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNYL1Q8N7R7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 AF106564.1-201ENST00000607058 2553 ntBASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL1Q8N7R7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNYL1Q8N7R7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms