Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 AC009237.3-201ENST00000393279 1427 ntBASIC21.89■■□□□ 1.1
PCDH20Q8N6Y1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH20Q8N6Y1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH20Q8N6Y1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH20Q8N6Y1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH20Q8N6Y1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 AC104564.3-201ENST00000582367 638 ntBASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDH20Q8N6Y1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH20Q8N6Y1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 KRT18P5-201ENST00000436075 1291 ntBASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 AL034346.1-201ENST00000568244 1277 ntBASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
PCDH20Q8N6Y1 AC005224.4-201ENST00000583262 1652 ntBASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDH20Q8N6Y1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH20Q8N6Y1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms