Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATPAF2Q8N5M1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATPAF2Q8N5M1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.03■■□□□ 1.12
ATPAF2Q8N5M1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.03■■□□□ 1.12
ATPAF2Q8N5M1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.03■■□□□ 1.12
ATPAF2Q8N5M1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATPAF2Q8N5M1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATPAF2Q8N5M1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.02■■□□□ 1.12
ATPAF2Q8N5M1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
ATPAF2Q8N5M1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATPAF2Q8N5M1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATPAF2Q8N5M1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATPAF2Q8N5M1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 IRS3P-201ENST00000223076 1006 ntBASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 AC012414.1-201ENST00000556676 535 ntBASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 LINC00565-201ENST00000562710 2331 ntBASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATPAF2Q8N5M1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATPAF2Q8N5M1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 AL354811.1-201ENST00000610286 706 ntBASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.96■■□□□ 1.11
ATPAF2Q8N5M1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms