Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SYCE1Q8N0S2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.66■■□□□ 1.22
SYCE1Q8N0S2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.66■■□□□ 1.22
SYCE1Q8N0S2 AC087239.1-201ENST00000622671 572 ntBASIC22.66■■□□□ 1.22
SYCE1Q8N0S2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYCE1Q8N0S2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.66■■□□□ 1.22
SYCE1Q8N0S2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.66■■□□□ 1.22
SYCE1Q8N0S2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 AC026471.6-201ENST00000622954 1905 ntBASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.65■■□□□ 1.22
SYCE1Q8N0S2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SYCE1Q8N0S2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SYCE1Q8N0S2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SYCE1Q8N0S2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SYCE1Q8N0S2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.64■■□□□ 1.22
SYCE1Q8N0S2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SYCE1Q8N0S2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SYCE1Q8N0S2 AC099791.2-201ENST00000605725 427 ntBASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
SYCE1Q8N0S2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 KRT16P3-201ENST00000439127 1283 ntBASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 OR2I1P-207ENST00000453522 948 ntBASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
SYCE1Q8N0S2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.62■■□□□ 1.21
SYCE1Q8N0S2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYCE1Q8N0S2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYCE1Q8N0S2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.61■■□□□ 1.21
SYCE1Q8N0S2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.61■■□□□ 1.21
SYCE1Q8N0S2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYCE1Q8N0S2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
SYCE1Q8N0S2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 AF106564.1-201ENST00000607058 2553 ntBASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 MIR3181-201ENST00000578512 73 ntBASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 AL356740.2-201ENST00000601559 647 ntBASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SYCE1Q8N0S2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms