Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.53■■□□□ 1.84
SLX4Q8IY92 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SLX4Q8IY92 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.53■■□□□ 1.84
SLX4Q8IY92 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.53■■□□□ 1.84
SLX4Q8IY92 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLX4Q8IY92 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLX4Q8IY92 BX276092.2-201ENST00000417668 665 ntBASIC26.52■■□□□ 1.84
SLX4Q8IY92 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLX4Q8IY92 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLX4Q8IY92 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
SLX4Q8IY92 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLX4Q8IY92 LINC01960-201ENST00000563759 1884 ntBASIC26.51■■□□□ 1.83
SLX4Q8IY92 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLX4Q8IY92 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLX4Q8IY92 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLX4Q8IY92 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLX4Q8IY92 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLX4Q8IY92 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLX4Q8IY92 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.51■■□□□ 1.83
SLX4Q8IY92 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.5■■□□□ 1.83
SLX4Q8IY92 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 AC079089.2-201ENST00000531211 1277 ntBASIC26.5■■□□□ 1.83
SLX4Q8IY92 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
SLX4Q8IY92 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.5■■□□□ 1.83
SLX4Q8IY92 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SLX4Q8IY92 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLX4Q8IY92 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLX4Q8IY92 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLX4Q8IY92 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLX4Q8IY92 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.49■■□□□ 1.83
SLX4Q8IY92 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.48■■□□□ 1.83
SLX4Q8IY92 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLX4Q8IY92 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLX4Q8IY92 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLX4Q8IY92 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLX4Q8IY92 AL512625.2-201ENST00000417533 625 ntBASIC26.48■■□□□ 1.83
SLX4Q8IY92 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.48■■□□□ 1.83
SLX4Q8IY92 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.48■■□□□ 1.83
SLX4Q8IY92 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.48■■□□□ 1.83
SLX4Q8IY92 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SLX4Q8IY92 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLX4Q8IY92 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.48■■□□□ 1.83
SLX4Q8IY92 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLX4Q8IY92 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLX4Q8IY92 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLX4Q8IY92 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLX4Q8IY92 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLX4Q8IY92 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLX4Q8IY92 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.47■■□□□ 1.83
SLX4Q8IY92 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.47■■□□□ 1.83
SLX4Q8IY92 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.47■■□□□ 1.83
SLX4Q8IY92 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.47■■□□□ 1.83
SLX4Q8IY92 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
SLX4Q8IY92 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLX4Q8IY92 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLX4Q8IY92 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLX4Q8IY92 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SLX4Q8IY92 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLX4Q8IY92 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SLX4Q8IY92 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLX4Q8IY92 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLX4Q8IY92 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SLX4Q8IY92 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.46■■□□□ 1.83
SLX4Q8IY92 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.46■■□□□ 1.83
SLX4Q8IY92 AC142381.4-202ENST00000563973 229 ntBASIC26.46■■□□□ 1.83
SLX4Q8IY92 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
SLX4Q8IY92 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SLX4Q8IY92 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms