Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM48Q8IWZ4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
TRIM48Q8IWZ4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM48Q8IWZ4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM48Q8IWZ4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 AC079140.4-201ENST00000507448 529 ntBASIC21■□□□□ 0.95
TRIM48Q8IWZ4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM48Q8IWZ4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 AC022517.1-201ENST00000592429 346 ntBASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 AP004607.7-201ENST00000527152 1677 ntBASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM48Q8IWZ4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 AC087742.1-201ENST00000575880 1738 ntBASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 AC005224.4-201ENST00000583262 1652 ntBASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM48Q8IWZ4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 AL034346.1-201ENST00000568244 1277 ntBASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 AL137784.2-201ENST00000607332 1000 ntBASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM48Q8IWZ4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 LINC00526-201ENST00000581067 1875 ntBASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM48Q8IWZ4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 PKD1P6-201ENST00000343738 4769 ntBASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms