Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.37■■□□□ 1.01
ZC3HC1Q86WB0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ZC3HC1Q86WB0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 AP005435.1-201ENST00000529293 1178 ntBASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZC3HC1Q86WB0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZC3HC1Q86WB0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.33■■□□□ 1.01
ZC3HC1Q86WB0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.33■■□□□ 1.01
ZC3HC1Q86WB0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ZC3HC1Q86WB0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.33■■□□□ 1.01
ZC3HC1Q86WB0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.33■■□□□ 1.01
ZC3HC1Q86WB0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 AC104564.3-201ENST00000582367 638 ntBASIC21.32■■□□□ 1
ZC3HC1Q86WB0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ZC3HC1Q86WB0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ZC3HC1Q86WB0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.3■■□□□ 1
ZC3HC1Q86WB0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.3■■□□□ 1
ZC3HC1Q86WB0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 AL136116.3-201ENST00000402907 1138 ntBASIC21.29■■□□□ 1
ZC3HC1Q86WB0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 AL034346.1-201ENST00000568244 1277 ntBASIC21.29■■□□□ 1
ZC3HC1Q86WB0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.29■■□□□ 1
ZC3HC1Q86WB0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3HC1Q86WB0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms