Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 AL353803.4-201ENST00000565882 1934 ntBASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.41■■□□□ 1.18
PTCRAQ6ISU1 AL121749.1-202ENST00000609313 2153 ntBASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 AC211429.1-201ENST00000415277 523 ntBASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 MIR4497-201ENST00000583208 89 ntBASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 AL359736.2-201ENST00000621992 437 ntBASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCRAQ6ISU1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTCRAQ6ISU1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PTCRAQ6ISU1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 REXO1L12P-201ENST00000622156 912 ntBASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 DUSP8P3-201ENST00000399571 1760 ntBASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCRAQ6ISU1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCRAQ6ISU1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCRAQ6ISU1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 AC010980.2-201ENST00000587099 1412 ntBASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 FAM197Y4-202ENST00000622692 608 ntBASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PTCRAQ6ISU1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms