Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RSPO4Q2I0M5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
RSPO4Q2I0M5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21■□□□□ 0.95
RSPO4Q2I0M5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 RPPH1-201ENST00000516869 333 ntBASIC21■□□□□ 0.95
RSPO4Q2I0M5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21■□□□□ 0.95
RSPO4Q2I0M5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21■□□□□ 0.95
RSPO4Q2I0M5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21■□□□□ 0.95
RSPO4Q2I0M5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21■□□□□ 0.95
RSPO4Q2I0M5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RSPO4Q2I0M5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 BX088651.1-201ENST00000540551 451 ntBASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 AC138907.5-202ENST00000569484 235 ntBASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 AC020928.2-201ENST00000588717 2197 ntBASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RSPO4Q2I0M5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 C1QBPP2-201ENST00000528754 825 ntBASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RSPO4Q2I0M5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 AL445228.2-201ENST00000605589 952 ntBASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RSPO4Q2I0M5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms