Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FOXF1Q12946 BX005040.4-201ENST00000637145 1518 ntBASIC19.47■□□□□ 0.71
FOXF1Q12946 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXF1Q12946 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.47■□□□□ 0.71
FOXF1Q12946 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.47■□□□□ 0.71
FOXF1Q12946 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXF1Q12946 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXF1Q12946 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXF1Q12946 FAM99A-202ENST00000538190 1989 ntBASIC19.46■□□□□ 0.71
FOXF1Q12946 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXF1Q12946 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXF1Q12946 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXF1Q12946 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXF1Q12946 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXF1Q12946 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXF1Q12946 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
FOXF1Q12946 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXF1Q12946 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXF1Q12946 C11orf96-202ENST00000528572 1834 ntBASIC19.46■□□□□ 0.71
FOXF1Q12946 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXF1Q12946 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FOXF1Q12946 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXF1Q12946 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXF1Q12946 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXF1Q12946 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.45■□□□□ 0.7
FOXF1Q12946 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 AC027612.3-201ENST00000413684 1047 ntBASIC19.45■□□□□ 0.7
FOXF1Q12946 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXF1Q12946 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
FOXF1Q12946 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
FOXF1Q12946 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXF1Q12946 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXF1Q12946 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXF1Q12946 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXF1Q12946 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FOXF1Q12946 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.44■□□□□ 0.7
FOXF1Q12946 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXF1Q12946 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXF1Q12946 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXF1Q12946 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXF1Q12946 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXF1Q12946 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXF1Q12946 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXF1Q12946 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXF1Q12946 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXF1Q12946 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXF1Q12946 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXF1Q12946 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.43■□□□□ 0.7
FOXF1Q12946 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXF1Q12946 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXF1Q12946 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
FOXF1Q12946 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXF1Q12946 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXF1Q12946 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXF1Q12946 AC079834.2-201ENST00000609776 1949 ntBASIC19.43■□□□□ 0.7
FOXF1Q12946 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXF1Q12946 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FOXF1Q12946 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXF1Q12946 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXF1Q12946 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
FOXF1Q12946 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXF1Q12946 TPRG1LP1-201ENST00000598702 760 ntBASIC19.42■□□□□ 0.7
FOXF1Q12946 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
FOXF1Q12946 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXF1Q12946 AC009237.3-201ENST00000393279 1427 ntBASIC19.42■□□□□ 0.7
FOXF1Q12946 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
FOXF1Q12946 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXF1Q12946 AP006587.3-201ENST00000525742 1516 ntBASIC19.41■□□□□ 0.7
FOXF1Q12946 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXF1Q12946 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXF1Q12946 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms