Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SYCNQ0VAF6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SYCNQ0VAF6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 AC010525.1-201ENST00000585559 441 ntBASIC14.16□□□□□ -0.14
SYCNQ0VAF6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 FBXW4P1-201ENST00000426721 2239 ntBASIC14.16□□□□□ -0.14
SYCNQ0VAF6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.16□□□□□ -0.14
SYCNQ0VAF6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SYCNQ0VAF6 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.15□□□□□ -0.15
SYCNQ0VAF6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 AC008406.3-201ENST00000620001 1374 ntBASIC14.14□□□□□ -0.15
SYCNQ0VAF6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 AP005435.1-201ENST00000529293 1178 ntBASIC14.14□□□□□ -0.15
SYCNQ0VAF6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 OXCT2P1-201ENST00000447263 1535 ntBASIC14.14□□□□□ -0.15
SYCNQ0VAF6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SYCNQ0VAF6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms