Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.25■□□□□ 0.35
CX3CL1P78423 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CL1P78423 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CL1P78423 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CX3CL1P78423 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CL1P78423 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CL1P78423 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CL1P78423 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CL1P78423 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CX3CL1P78423 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CX3CL1P78423 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CL1P78423 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CX3CL1P78423 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CX3CL1P78423 AC139530.1-201ENST00000575312 1977 ntBASIC17.24■□□□□ 0.35
CX3CL1P78423 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.24■□□□□ 0.35
CX3CL1P78423 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.24■□□□□ 0.35
CX3CL1P78423 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 AC099791.1-201ENST00000416440 715 ntBASIC17.24■□□□□ 0.35
CX3CL1P78423 AP001330.3-201ENST00000520123 633 ntBASIC17.24■□□□□ 0.35
CX3CL1P78423 AC027682.1-201ENST00000562846 899 ntBASIC17.24■□□□□ 0.35
CX3CL1P78423 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.24■□□□□ 0.35
CX3CL1P78423 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.24■□□□□ 0.35
CX3CL1P78423 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CL1P78423 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.23■□□□□ 0.35
CX3CL1P78423 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CX3CL1P78423 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CX3CL1P78423 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CX3CL1P78423 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.23■□□□□ 0.35
CX3CL1P78423 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.23■□□□□ 0.35
CX3CL1P78423 AC079089.2-201ENST00000531211 1277 ntBASIC17.23■□□□□ 0.35
CX3CL1P78423 AF213884.3-201ENST00000563833 479 ntBASIC17.23■□□□□ 0.35
CX3CL1P78423 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.23■□□□□ 0.35
CX3CL1P78423 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CL1P78423 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CX3CL1P78423 OXCT2P1-201ENST00000447263 1535 ntBASIC17.22■□□□□ 0.35
CX3CL1P78423 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CX3CL1P78423 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
CX3CL1P78423 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CX3CL1P78423 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CX3CL1P78423 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.22■□□□□ 0.35
CX3CL1P78423 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CX3CL1P78423 MIR939-201ENST00000401314 82 ntBASIC17.22■□□□□ 0.35
CX3CL1P78423 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.22■□□□□ 0.35
CX3CL1P78423 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.22■□□□□ 0.35
CX3CL1P78423 AL031432.3-201ENST00000607698 485 ntBASIC17.22■□□□□ 0.35
CX3CL1P78423 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.22■□□□□ 0.35
CX3CL1P78423 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.22■□□□□ 0.35
CX3CL1P78423 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CX3CL1P78423 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CX3CL1P78423 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CX3CL1P78423 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CX3CL1P78423 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CX3CL1P78423 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.22■□□□□ 0.35
CX3CL1P78423 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CX3CL1P78423 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.22■□□□□ 0.35
CX3CL1P78423 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CX3CL1P78423 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CX3CL1P78423 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.21■□□□□ 0.35
CX3CL1P78423 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 RASA4CP-201ENST00000424092 1398 ntBASIC17.21■□□□□ 0.35
CX3CL1P78423 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.21■□□□□ 0.35
CX3CL1P78423 AC091305.1-201ENST00000479476 895 ntBASIC17.21■□□□□ 0.35
CX3CL1P78423 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 AL136967.2-201ENST00000623968 743 ntBASIC17.21■□□□□ 0.35
CX3CL1P78423 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.21■□□□□ 0.35
CX3CL1P78423 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CX3CL1P78423 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.21■□□□□ 0.34
CX3CL1P78423 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CX3CL1P78423 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CX3CL1P78423 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.2■□□□□ 0.34
CX3CL1P78423 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CX3CL1P78423 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CX3CL1P78423 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CX3CL1P78423 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CX3CL1P78423 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms