Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.55■□□□□ 0.72
CXCR4P61073 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.55■□□□□ 0.72
CXCR4P61073 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCR4P61073 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.55■□□□□ 0.72
CXCR4P61073 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.55■□□□□ 0.72
CXCR4P61073 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CXCR4P61073 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.55■□□□□ 0.72
CXCR4P61073 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.55■□□□□ 0.72
CXCR4P61073 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CXCR4P61073 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.55■□□□□ 0.72
CXCR4P61073 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCR4P61073 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCR4P61073 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCR4P61073 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CXCR4P61073 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CXCR4P61073 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CXCR4P61073 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.54■□□□□ 0.72
CXCR4P61073 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CXCR4P61073 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CXCR4P61073 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CXCR4P61073 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CXCR4P61073 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CXCR4P61073 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CXCR4P61073 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CXCR4P61073 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CXCR4P61073 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.54■□□□□ 0.72
CXCR4P61073 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
CXCR4P61073 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 AC005703.6-201ENST00000623265 1329 ntBASIC19.53■□□□□ 0.72
CXCR4P61073 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 AC104564.3-201ENST00000582367 638 ntBASIC19.53■□□□□ 0.72
CXCR4P61073 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.53■□□□□ 0.72
CXCR4P61073 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.53■□□□□ 0.72
CXCR4P61073 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCR4P61073 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.52■□□□□ 0.72
CXCR4P61073 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CXCR4P61073 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CXCR4P61073 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.52■□□□□ 0.72
CXCR4P61073 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CXCR4P61073 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CXCR4P61073 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CXCR4P61073 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.52■□□□□ 0.72
CXCR4P61073 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.52■□□□□ 0.72
CXCR4P61073 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.52■□□□□ 0.72
CXCR4P61073 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.52■□□□□ 0.72
CXCR4P61073 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CXCR4P61073 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CXCR4P61073 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
CXCR4P61073 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CXCR4P61073 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CXCR4P61073 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CXCR4P61073 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CXCR4P61073 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.51■□□□□ 0.71
CXCR4P61073 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 MIR6722-201ENST00000617286 78 ntBASIC19.51■□□□□ 0.71
CXCR4P61073 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.51■□□□□ 0.71
CXCR4P61073 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CXCR4P61073 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CXCR4P61073 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CXCR4P61073 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CXCR4P61073 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.5■□□□□ 0.71
CXCR4P61073 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CXCR4P61073 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CXCR4P61073 AL031848.2-201ENST00000607670 837 ntBASIC19.5■□□□□ 0.71
CXCR4P61073 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CXCR4P61073 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CXCR4P61073 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CXCR4P61073 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CXCR4P61073 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CXCR4P61073 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CXCR4P61073 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms