Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CKS1BP61024 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.9□□□□□ -0.02
CKS1BP61024 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.9□□□□□ -0.02
CKS1BP61024 AC129492.7-201ENST00000622992 756 ntBASIC14.9□□□□□ -0.02
CKS1BP61024 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS1BP61024 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CKS1BP61024 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 LSR-203ENST00000360798 1963 ntTSL 2 BASIC14.89□□□□□ -0.03
CKS1BP61024 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CKS1BP61024 AC019171.1-201ENST00000601251 1056 ntBASIC14.89□□□□□ -0.03
CKS1BP61024 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.89□□□□□ -0.03
CKS1BP61024 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 AC079630.1-202ENST00000618127 1840 ntBASIC14.89□□□□□ -0.03
CKS1BP61024 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
CKS1BP61024 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CKS1BP61024 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CKS1BP61024 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.89□□□□□ -0.03
CKS1BP61024 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKS1BP61024 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.88□□□□□ -0.03
CKS1BP61024 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
CKS1BP61024 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.88□□□□□ -0.03
CKS1BP61024 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 RARRES2P2-201ENST00000394842 485 ntBASIC14.88□□□□□ -0.03
CKS1BP61024 BHLHE23-202ENST00000612929 1109 ntBASIC14.88□□□□□ -0.03
CKS1BP61024 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CKS1BP61024 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CKS1BP61024 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS1BP61024 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.87□□□□□ -0.03
CKS1BP61024 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.87□□□□□ -0.03
CKS1BP61024 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.87□□□□□ -0.03
CKS1BP61024 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.87□□□□□ -0.03
CKS1BP61024 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.87□□□□□ -0.03
CKS1BP61024 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CKS1BP61024 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.87□□□□□ -0.03
CKS1BP61024 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CKS1BP61024 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS1BP61024 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CKS1BP61024 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CKS1BP61024 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS1BP61024 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS1BP61024 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.86□□□□□ -0.03
CKS1BP61024 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS1BP61024 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CKS1BP61024 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms