Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM11AP58511 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM11AP58511 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM11AP58511 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM11AP58511 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM11AP58511 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM11AP58511 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.76■□□□□ 0.75
SMIM11AP58511 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM11AP58511 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM11AP58511 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
SMIM11AP58511 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SMIM11AP58511 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM11AP58511 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM11AP58511 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM11AP58511 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM11AP58511 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM11AP58511 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM11AP58511 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM11AP58511 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM11AP58511 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMIM11AP58511 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMIM11AP58511 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM11AP58511 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM11AP58511 AL451085.2-201ENST00000605085 799 ntBASIC19.74■□□□□ 0.75
SMIM11AP58511 AC087239.1-201ENST00000622671 572 ntBASIC19.74■□□□□ 0.75
SMIM11AP58511 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM11AP58511 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.74■□□□□ 0.75
SMIM11AP58511 FEM1AP4-201ENST00000443167 1987 ntBASIC19.74■□□□□ 0.75
SMIM11AP58511 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMIM11AP58511 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM11AP58511 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM11AP58511 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.73■□□□□ 0.75
SMIM11AP58511 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM11AP58511 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM11AP58511 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM11AP58511 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM11AP58511 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.73■□□□□ 0.75
SMIM11AP58511 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.72■□□□□ 0.75
SMIM11AP58511 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SMIM11AP58511 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.72■□□□□ 0.75
SMIM11AP58511 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SMIM11AP58511 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM11AP58511 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMIM11AP58511 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM11AP58511 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM11AP58511 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMIM11AP58511 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
SMIM11AP58511 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM11AP58511 pRNA.6-201ENST00000610482 90 ntBASIC19.72■□□□□ 0.75
SMIM11AP58511 pRNA.5-201ENST00000612139 90 ntBASIC19.72■□□□□ 0.75
SMIM11AP58511 pRNA.11-201ENST00000618423 90 ntBASIC19.72■□□□□ 0.75
SMIM11AP58511 pRNA.13-201ENST00000619112 90 ntBASIC19.72■□□□□ 0.75
SMIM11AP58511 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM11AP58511 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM11AP58511 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SMIM11AP58511 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMIM11AP58511 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM11AP58511 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM11AP58511 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SMIM11AP58511 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMIM11AP58511 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM11AP58511 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM11AP58511 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM11AP58511 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM11AP58511 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM11AP58511 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM11AP58511 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.71■□□□□ 0.75
SMIM11AP58511 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
SMIM11AP58511 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM11AP58511 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM11AP58511 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM11AP58511 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM11AP58511 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SMIM11AP58511 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM11AP58511 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMIM11AP58511 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMIM11AP58511 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM11AP58511 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM11AP58511 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
SMIM11AP58511 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.7■□□□□ 0.74
SMIM11AP58511 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMIM11AP58511 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM11AP58511 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM11AP58511 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM11AP58511 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM11AP58511 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM11AP58511 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms