Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RAB38P57729 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB38P57729 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.22■□□□□ 0.83
RAB38P57729 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAB38P57729 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB38P57729 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB38P57729 AP006587.3-201ENST00000525742 1516 ntBASIC20.22■□□□□ 0.83
RAB38P57729 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB38P57729 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB38P57729 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB38P57729 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB38P57729 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RAB38P57729 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB38P57729 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.2■□□□□ 0.83
RAB38P57729 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB38P57729 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB38P57729 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB38P57729 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RAB38P57729 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.2■□□□□ 0.82
RAB38P57729 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.2■□□□□ 0.82
RAB38P57729 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 FAM99A-202ENST00000538190 1989 ntBASIC20.2■□□□□ 0.82
RAB38P57729 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB38P57729 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB38P57729 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB38P57729 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RAB38P57729 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB38P57729 AC097381.1-201ENST00000429019 1296 ntBASIC20.19■□□□□ 0.82
RAB38P57729 RARRES2P6-201ENST00000567333 442 ntBASIC20.19■□□□□ 0.82
RAB38P57729 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB38P57729 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RAB38P57729 AC055733.4-201ENST00000638462 1354 ntBASIC20.19■□□□□ 0.82
RAB38P57729 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RAB38P57729 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RAB38P57729 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB38P57729 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.18■□□□□ 0.82
RAB38P57729 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB38P57729 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAB38P57729 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.18■□□□□ 0.82
RAB38P57729 MIR6821-201ENST00000617625 74 ntBASIC20.18■□□□□ 0.82
RAB38P57729 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAB38P57729 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAB38P57729 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RAB38P57729 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
RAB38P57729 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB38P57729 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB38P57729 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB38P57729 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB38P57729 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB38P57729 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB38P57729 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB38P57729 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB38P57729 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RAB38P57729 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB38P57729 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAB38P57729 CCDC92B-201ENST00000575506 885 ntBASIC20.17■□□□□ 0.82
RAB38P57729 TERF1P2-201ENST00000583350 1212 ntBASIC20.17■□□□□ 0.82
RAB38P57729 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB38P57729 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.17■□□□□ 0.82
RAB38P57729 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB38P57729 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB38P57729 EP400NL-214ENST00000641289 2402 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms