Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN20P56880 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN20P56880 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN20P56880 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN20P56880 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN20P56880 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN20P56880 AC087239.1-201ENST00000622671 572 ntBASIC19.63■□□□□ 0.73
CLDN20P56880 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN20P56880 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN20P56880 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN20P56880 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN20P56880 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN20P56880 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CLDN20P56880 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN20P56880 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN20P56880 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.62■□□□□ 0.73
CLDN20P56880 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CLDN20P56880 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN20P56880 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN20P56880 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN20P56880 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN20P56880 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN20P56880 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN20P56880 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN20P56880 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN20P56880 AC242852.2-201ENST00000615738 1807 ntBASIC19.61■□□□□ 0.73
CLDN20P56880 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN20P56880 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.61■□□□□ 0.73
CLDN20P56880 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.61■□□□□ 0.73
CLDN20P56880 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN20P56880 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN20P56880 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN20P56880 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN20P56880 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLDN20P56880 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLDN20P56880 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN20P56880 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN20P56880 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CLDN20P56880 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN20P56880 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.6■□□□□ 0.73
CLDN20P56880 MIR6084-201ENST00000622012 110 ntBASIC19.6■□□□□ 0.73
CLDN20P56880 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN20P56880 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN20P56880 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLDN20P56880 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CLDN20P56880 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN20P56880 AC012414.1-201ENST00000556676 535 ntBASIC19.59■□□□□ 0.73
CLDN20P56880 RARRES2P6-201ENST00000567333 442 ntBASIC19.59■□□□□ 0.73
CLDN20P56880 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 AC105233.4-201ENST00000642045 216 ntBASIC19.59■□□□□ 0.73
CLDN20P56880 OXCT2P1-201ENST00000447263 1535 ntBASIC19.59■□□□□ 0.73
CLDN20P56880 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 AC087742.1-201ENST00000575880 1738 ntBASIC19.59■□□□□ 0.73
CLDN20P56880 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN20P56880 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN20P56880 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
CLDN20P56880 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN20P56880 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN20P56880 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN20P56880 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN20P56880 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN20P56880 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN20P56880 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
CLDN20P56880 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLDN20P56880 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN20P56880 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLDN20P56880 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN20P56880 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN20P56880 AL358852.1-201ENST00000623174 1268 ntBASIC19.58■□□□□ 0.72
CLDN20P56880 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN20P56880 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN20P56880 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN20P56880 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms