Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN17P56750 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN17P56750 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLDN17P56750 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN17P56750 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN17P56750 AP004607.7-201ENST00000527152 1677 ntBASIC19.17■□□□□ 0.66
CLDN17P56750 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLDN17P56750 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CLDN17P56750 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN17P56750 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN17P56750 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN17P56750 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN17P56750 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN17P56750 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN17P56750 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN17P56750 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN17P56750 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN17P56750 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN17P56750 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN17P56750 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN17P56750 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CLDN17P56750 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLDN17P56750 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN17P56750 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN17P56750 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CLDN17P56750 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN17P56750 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN17P56750 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN17P56750 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN17P56750 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN17P56750 AL034346.1-201ENST00000568244 1277 ntBASIC19.14■□□□□ 0.65
CLDN17P56750 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN17P56750 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN17P56750 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN17P56750 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN17P56750 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN17P56750 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 FAM99A-202ENST00000538190 1989 ntBASIC19.13■□□□□ 0.65
CLDN17P56750 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN17P56750 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN17P56750 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN17P56750 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLDN17P56750 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN17P56750 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN17P56750 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN17P56750 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN17P56750 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN17P56750 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN17P56750 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN17P56750 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 IRS3P-201ENST00000223076 1006 ntBASIC19.12■□□□□ 0.65
CLDN17P56750 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.12■□□□□ 0.65
CLDN17P56750 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN17P56750 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.12■□□□□ 0.65
CLDN17P56750 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLDN17P56750 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CLDN17P56750 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN17P56750 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLDN17P56750 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN17P56750 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN17P56750 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN17P56750 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN17P56750 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN17P56750 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms