Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3P54252 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3P54252 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.81■■□□□ 1.08
ATXN3P54252 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3P54252 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3P54252 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3P54252 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3P54252 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ATXN3P54252 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ATXN3P54252 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3P54252 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.8■■□□□ 1.08
ATXN3P54252 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.8■■□□□ 1.08
ATXN3P54252 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.8■■□□□ 1.08
ATXN3P54252 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3P54252 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.8■■□□□ 1.08
ATXN3P54252 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.8■■□□□ 1.08
ATXN3P54252 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.8■■□□□ 1.08
ATXN3P54252 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
ATXN3P54252 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3P54252 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3P54252 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.8■■□□□ 1.08
ATXN3P54252 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.79■■□□□ 1.08
ATXN3P54252 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3P54252 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3P54252 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3P54252 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.79■■□□□ 1.08
ATXN3P54252 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.79■■□□□ 1.08
ATXN3P54252 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.79■■□□□ 1.08
ATXN3P54252 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.79■■□□□ 1.08
ATXN3P54252 AC104771.1-201ENST00000603335 964 ntBASIC21.79■■□□□ 1.08
ATXN3P54252 RAP2CP1-201ENST00000605103 478 ntBASIC21.79■■□□□ 1.08
ATXN3P54252 AL109923.1-201ENST00000618799 583 ntBASIC21.79■■□□□ 1.08
ATXN3P54252 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3P54252 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3P54252 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ATXN3P54252 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN3P54252 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 LINC01529-204ENST00000636474 1715 ntBASIC21.78■■□□□ 1.08
ATXN3P54252 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATXN3P54252 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.78■■□□□ 1.08
ATXN3P54252 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.78■■□□□ 1.08
ATXN3P54252 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.78■■□□□ 1.08
ATXN3P54252 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ATXN3P54252 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ATXN3P54252 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN3P54252 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
ATXN3P54252 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ATXN3P54252 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3P54252 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.77■■□□□ 1.08
ATXN3P54252 KRT19P1-201ENST00000405746 1186 ntBASIC21.77■■□□□ 1.08
ATXN3P54252 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ATXN3P54252 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3P54252 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.77■■□□□ 1.08
ATXN3P54252 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN3P54252 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ATXN3P54252 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
ATXN3P54252 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATXN3P54252 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATXN3P54252 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ATXN3P54252 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATXN3P54252 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.76■■□□□ 1.07
ATXN3P54252 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.76■■□□□ 1.07
ATXN3P54252 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.76■■□□□ 1.07
ATXN3P54252 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATXN3P54252 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
ATXN3P54252 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATXN3P54252 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ATXN3P54252 GUSBP5-202ENST00000510805 1989 ntBASIC21.76■■□□□ 1.07
ATXN3P54252 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3P54252 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3P54252 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3P54252 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3P54252 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.75■■□□□ 1.07
ATXN3P54252 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.75■■□□□ 1.07
ATXN3P54252 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.75■■□□□ 1.07
ATXN3P54252 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms