Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 SPT6YGR116W 4356 nt3.77□□□□□ -1.81
RPT4P53549 YOS1YER074W-A 258 nt3.77□□□□□ -1.81
RPT4P53549 YAL004WYAL004W 648 nt3.77□□□□□ -1.81
RPT4P53549 RPL8BYLL045C 771 nt3.77□□□□□ -1.81
RPT4P53549 MED11YMR112C 396 nt3.77□□□□□ -1.81
RPT4P53549 YBR103C-AYBR103C-A 144 nt3.77□□□□□ -1.81
RPT4P53549 SRO7YPR032W 3102 nt3.77□□□□□ -1.81
RPT4P53549 VAC8YEL013W 1737 nt3.77□□□□□ -1.81
RPT4P53549 MDN1YLR106C 14733 nt3.77□□□□□ -1.81
RPT4P53549 TPD3YAL016W 1908 nt3.77□□□□□ -1.81
RPT4P53549 NAT1YDL040C 2565 nt3.77□□□□□ -1.81
RPT4P53549 OSH3YHR073W 2991 nt3.77□□□□□ -1.81
RPT4P53549 MGA1YGR249W 1371 nt3.76□□□□□ -1.81
RPT4P53549 DSS1YMR287C 2910 nt3.76□□□□□ -1.81
RPT4P53549 ACA1YER045C 1470 nt3.76□□□□□ -1.81
RPT4P53549 MEK1YOR351C 1494 nt3.76□□□□□ -1.81
RPT4P53549 RTA1YGR213C 954 nt3.76□□□□□ -1.81
RPT4P53549 PPE1YHR075C 1203 nt3.76□□□□□ -1.81
RPT4P53549 PCL7YIL050W 858 nt3.76□□□□□ -1.81
RPT4P53549 RPL15AYLR029C 615 nt3.76□□□□□ -1.81
RPT4P53549 USB1YLR132C 873 nt3.76□□□□□ -1.81
RPT4P53549 RPN8YOR261C 1017 nt3.76□□□□□ -1.81
RPT4P53549 USV1YPL230W 1176 nt3.76□□□□□ -1.81
RPT4P53549 YPR108W-AYPR108W-A 213 nt3.76□□□□□ -1.81
RPT4P53549 SER3YER081W 1410 nt3.76□□□□□ -1.81
RPT4P53549 DBP5YOR046C 1449 nt3.76□□□□□ -1.81
RPT4P53549 YCR024C-BYCR024C-B 267 nt3.75□□□□□ -1.81
RPT4P53549 SOL3YHR163W 750 nt3.75□□□□□ -1.81
RPT4P53549 POP8YBL018C 402 nt3.75□□□□□ -1.81
RPT4P53549 ATG16YMR159C 453 nt3.75□□□□□ -1.81
RPT4P53549 SSO2YMR183C 888 nt3.75□□□□□ -1.81
RPT4P53549 SEG1YMR086W 2883 nt3.75□□□□□ -1.81
RPT4P53549 APL4YPR029C 2499 nt3.75□□□□□ -1.81
RPT4P53549 TRK1YJL129C 3708 nt3.74□□□□□ -1.81
RPT4P53549 ECM22YLR228C 2445 nt3.74□□□□□ -1.81
RPT4P53549 NTO1YPR031W 2247 nt3.74□□□□□ -1.81
RPT4P53549 EPO1YMR124W 2832 nt3.74□□□□□ -1.81
RPT4P53549 FCF1YDR339C 570 nt3.74□□□□□ -1.81
RPT4P53549 MIG3YER028C 1185 nt3.74□□□□□ -1.81
RPT4P53549 LSM12YHR121W 564 nt3.74□□□□□ -1.81
RPT4P53549 YKL033W-AYKL033W-A 711 nt3.74□□□□□ -1.81
RPT4P53549 SIL1YOL031C 1266 nt3.74□□□□□ -1.81
RPT4P53549 DDP1YOR163W 567 nt3.74□□□□□ -1.81
RPT4P53549 SPP381YBR152W 876 nt3.74□□□□□ -1.81
RPT4P53549 UBS1YBR165W 834 nt3.74□□□□□ -1.81
RPT4P53549 LDH1YBR204C 1128 nt3.74□□□□□ -1.81
RPT4P53549 AEP3YPL005W 1821 nt3.74□□□□□ -1.81
RPT4P53549 TGL3YMR313C 1929 nt3.74□□□□□ -1.81
RPT4P53549 YOR022CYOR022C 2148 nt3.73□□□□□ -1.81
RPT4P53549 RPN4YDL020C 1596 nt3.73□□□□□ -1.81
RPT4P53549 CIT1YNR001C 1440 nt3.73□□□□□ -1.81
RPT4P53549 YRM1YOR172W 2361 nt3.73□□□□□ -1.81
RPT4P53549 GRX3YDR098C 858 nt3.73□□□□□ -1.81
RPT4P53549 ISC10YER180C 804 nt3.73□□□□□ -1.81
RPT4P53549 PET130YJL023C 1044 nt3.73□□□□□ -1.81
RPT4P53549 ENT3YJR125C 1227 nt3.73□□□□□ -1.81
RPT4P53549 ARG80YMR042W 534 nt3.73□□□□□ -1.81
RPT4P53549 IZH4YOL101C 939 nt3.73□□□□□ -1.81
RPT4P53549 PFK27YOL136C 1194 nt3.73□□□□□ -1.81
RPT4P53549 SSP2YOR242C 1116 nt3.73□□□□□ -1.81
RPT4P53549 CDC14YFR028C 1656 nt3.73□□□□□ -1.81
RPT4P53549 TRM12YML005W 1389 nt3.73□□□□□ -1.81
RPT4P53549 YPR003CYPR003C 2265 nt3.73□□□□□ -1.81
RPT4P53549 SNT1YCR033W 3681 nt3.73□□□□□ -1.81
RPT4P53549 APN2YBL019W 1563 nt3.72□□□□□ -1.81
RPT4P53549 PGS1YCL004W 1566 nt3.72□□□□□ -1.81
RPT4P53549 ARG5,6YER069W 2592 nt3.72□□□□□ -1.81
RPT4P53549 PEP7YDR323C 1548 nt3.72□□□□□ -1.81
RPT4P53549 SAW1YAL027W 786 nt3.72□□□□□ -1.81
RPT4P53549 BAG7YOR134W 1230 nt3.72□□□□□ -1.81
RPT4P53549 YOR263CYOR263C 408 nt3.72□□□□□ -1.81
RPT4P53549 YBR096WYBR096W 693 nt3.72□□□□□ -1.81
RPT4P53549 EPL1YFL024C 2499 nt3.72□□□□□ -1.81
RPT4P53549 YMR317WYMR317W 3423 nt3.72□□□□□ -1.81
RPT4P53549 SDS23YGL056C 1584 nt3.72□□□□□ -1.81
RPT4P53549 PAM1YDR251W 2493 nt3.71□□□□□ -1.81
RPT4P53549 YGR117CYGR117C 1431 nt3.71□□□□□ -1.82
RPT4P53549 THR4YCR053W 1545 nt3.71□□□□□ -1.82
RPT4P53549 RRN7YJL025W 1545 nt3.71□□□□□ -1.82
RPT4P53549 YGR168CYGR168C 1131 nt3.71□□□□□ -1.82
RPT4P53549 YML047W-AYML047W-A 366 nt3.71□□□□□ -1.82
RPT4P53549 RIM9YMR063W 720 nt3.71□□□□□ -1.82
RPT4P53549 YBL039W-BYBL039W-B 180 nt3.71□□□□□ -1.82
RPT4P53549 NIS1YNL078W 1224 nt3.71□□□□□ -1.82
RPT4P53549 ARA1YBR149W 1035 nt3.71□□□□□ -1.82
RPT4P53549 PLM2YDR501W 1566 nt3.71□□□□□ -1.82
RPT4P53549 NUP85YJR042W 2235 nt3.71□□□□□ -1.82
RPT4P53549 URA2YJL130C 6645 nt3.71□□□□□ -1.82
RPT4P53549 ULP1YPL020C 1866 nt3.71□□□□□ -1.82
RPT4P53549 RIM4YHL024W 2142 nt3.7□□□□□ -1.82
RPT4P53549 SSM4YIL030C 3960 nt3.7□□□□□ -1.82
RPT4P53549 YGR026WYGR026W 837 nt3.7□□□□□ -1.82
RPT4P53549 SOP4YJL192C 705 nt3.7□□□□□ -1.82
RPT4P53549 YJR128WYJR128W 360 nt3.7□□□□□ -1.82
RPT4P53549 HOT13YKL084W 351 nt3.7□□□□□ -1.82
RPT4P53549 YPR074W-AYPR074W-A 171 nt3.7□□□□□ -1.82
RPT4P53549 YBR242WYBR242W 717 nt3.7□□□□□ -1.82
RPT4P53549 NUF2YOL069W 1356 nt3.7□□□□□ -1.82
RPT4P53549 DNM1YLL001W 2274 nt3.7□□□□□ -1.82
RPT4P53549 YPR022CYPR022C 3402 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 42 ms