Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeast

Predictions only

Length 291 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	P49954	CST9	YLR394W	1449 nt		4.51	□□□□□ -1.69
NIT3	P49954	DSN1	YIR010W	1731 nt		4.51	□□□□□ -1.69
NIT3	P49954	GAL10	YBR019C	2100 nt		4.51	□□□□□ -1.69
NIT3	P49954	DSL1	YNL258C	2265 nt		4.51	□□□□□ -1.69
NIT3	P49954	YDR170W-A	YDR170W-A	1323 nt		4.5	□□□□□ -1.69
NIT3	P49954	YMR046C	YMR046C	1323 nt		4.5	□□□□□ -1.69
NIT3	P49954	RDS2	YPL133C	1341 nt		4.5	□□□□□ -1.69
NIT3	P49954	YCR085W	YCR085W	354 nt		4.5	□□□□□ -1.69
NIT3	P49954	SLC1	YDL052C	912 nt		4.5	□□□□□ -1.69
NIT3	P49954	YIP1	YGR172C	747 nt		4.5	□□□□□ -1.69
NIT3	P49954	YJR038C	YJR038C	363 nt		4.5	□□□□□ -1.69
NIT3	P49954	ERG3	YLR056W	1098 nt		4.5	□□□□□ -1.69
NIT3	P49954	YLR264C-A	YLR264C-A	117 nt		4.5	□□□□□ -1.69
NIT3	P49954	YNL203C	YNL203C	612 nt		4.5	□□□□□ -1.69
NIT3	P49954	RGS2	YOR107W	930 nt		4.5	□□□□□ -1.69
NIT3	P49954	AVT1	YJR001W	1809 nt		4.5	□□□□□ -1.69
NIT3	P49954	THI20	YOL055C	1656 nt		4.5	□□□□□ -1.69
NIT3	P49954	SRS2	YJL092W	3525 nt		4.5	□□□□□ -1.69
NIT3	P49954	KIN3	YAR018C	1308 nt		4.49	□□□□□ -1.69
NIT3	P49954	ATM1	YMR301C	2073 nt		4.49	□□□□□ -1.69
NIT3	P49954	DPB4	YDR121W	591 nt		4.49	□□□□□ -1.69
NIT3	P49954	NAG1	YGR031C-A	492 nt		4.49	□□□□□ -1.69
NIT3	P49954	ERP1	YAR002C-A	660 nt		4.49	□□□□□ -1.69
NIT3	P49954	MRP21	YBL090W	534 nt		4.49	□□□□□ -1.69
NIT3	P49954	SPC29	YPL124W	762 nt		4.49	□□□□□ -1.69
NIT3	P49954	STE7	YDL159W	1548 nt		4.49	□□□□□ -1.69
NIT3	P49954	VID30	YGL227W	2877 nt		4.49	□□□□□ -1.69
NIT3	P49954	PIG2	YIL045W	1617 nt		4.49	□□□□□ -1.69
NIT3	P49954	SLY41	YOR307C	1362 nt		4.49	□□□□□ -1.69
NIT3	P49954	NDC1	YML031W	1968 nt		4.49	□□□□□ -1.69
NIT3	P49954	PUT2	YHR037W	1728 nt		4.49	□□□□□ -1.69
NIT3	P49954	PRR1	YKL116C	1557 nt		4.48	□□□□□ -1.69
NIT3	P49954	GDB1	YPR184W	4611 nt		4.48	□□□□□ -1.69
NIT3	P49954	YPS7	YDR349C	1791 nt		4.48	□□□□□ -1.69
NIT3	P49954	MGS1	YNL218W	1764 nt		4.48	□□□□□ -1.69
NIT3	P49954	SPR3	YGR059W	1539 nt		4.48	□□□□□ -1.69
NIT3	P49954	THO1	YER063W	657 nt		4.48	□□□□□ -1.69
NIT3	P49954	YJL007C	YJL007C	315 nt		4.48	□□□□□ -1.69
NIT3	P49954	PRM10	YJL108C	1152 nt		4.48	□□□□□ -1.69
NIT3	P49954	MAK16	YAL025C	921 nt		4.48	□□□□□ -1.69
NIT3	P49954	KTI12	YKL110C	942 nt		4.48	□□□□□ -1.69
NIT3	P49954	YPL205C	YPL205C	345 nt		4.48	□□□□□ -1.69
NIT3	P49954	MSM1	YGR171C	1728 nt		4.48	□□□□□ -1.69
NIT3	P49954	NNK1	YKL171W	2787 nt		4.48	□□□□□ -1.69
NIT3	P49954	GCN5	YGR252W	1320 nt		4.47	□□□□□ -1.69
NIT3	P49954	RTT109	YLL002W	1311 nt		4.47	□□□□□ -1.69
NIT3	P49954	YDR261C-D	YDR261C-D	4815 nt		4.47	□□□□□ -1.69
NIT3	P49954	CNN1	YFR046C	1086 nt		4.47	□□□□□ -1.69
NIT3	P49954	YGR042W	YGR042W	816 nt		4.47	□□□□□ -1.69
NIT3	P49954	YHR175W-A	YHR175W-A	150 nt		4.47	□□□□□ -1.69
NIT3	P49954	MNN11	YJL183W	1269 nt		4.47	□□□□□ -1.69
NIT3	P49954	SRP1	YNL189W	1629 nt		4.46	□□□□□ -1.69
NIT3	P49954	TRF5	YNL299W	1929 nt		4.46	□□□□□ -1.69
NIT3	P49954	CDC5	YMR001C	2118 nt		4.46	□□□□□ -1.69
NIT3	P49954	YJL206C	YJL206C	2277 nt		4.46	□□□□□ -1.7
NIT3	P49954	YPL109C	YPL109C	1974 nt		4.46	□□□□□ -1.7
NIT3	P49954	APJ1	YNL077W	1587 nt		4.46	□□□□□ -1.7
NIT3	P49954	NOP8	YOL144W	1455 nt		4.46	□□□□□ -1.7
NIT3	P49954	BSC1	YDL037C	987 nt		4.46	□□□□□ -1.7
NIT3	P49954	RPL28	YGL103W	450 nt		4.46	□□□□□ -1.7
NIT3	P49954	THG1	YGR024C	714 nt		4.46	□□□□□ -1.7
NIT3	P49954	YGR114C	YGR114C	390 nt		4.46	□□□□□ -1.7
NIT3	P49954	YGR269W	YGR269W	327 nt		4.46	□□□□□ -1.7
NIT3	P49954	YHL048C-A	YHL048C-A	135 nt		4.46	□□□□□ -1.7
NIT3	P49954	TIM10	YHR005C-A	282 nt		4.46	□□□□□ -1.7
NIT3	P49954	RPL17A	YKL180W	555 nt		4.46	□□□□□ -1.7
NIT3	P49954	ATP14	YLR295C	375 nt		4.46	□□□□□ -1.7
NIT3	P49954	YMR144W	YMR144W	1029 nt		4.46	□□□□□ -1.7
NIT3	P49954	YNL109W	YNL109W	546 nt		4.46	□□□□□ -1.7
NIT3	P49954	YNL122C	YNL122C	348 nt		4.46	□□□□□ -1.7
NIT3	P49954	UTP23	YOR004W	765 nt		4.46	□□□□□ -1.7
NIT3	P49954	YBR242W	YBR242W	717 nt		4.46	□□□□□ -1.7
NIT3	P49954	KRE2	YDR483W	1329 nt		4.46	□□□□□ -1.7
NIT3	P49954	ORC6	YHR118C	1308 nt		4.46	□□□□□ -1.7
NIT3	P49954	RSC6	YCR052W	1452 nt		4.45	□□□□□ -1.7
NIT3	P49954	THP1	YOL072W	1368 nt		4.45	□□□□□ -1.7
NIT3	P49954	AAD4	YDL243C	990 nt		4.45	□□□□□ -1.7
NIT3	P49954	YDR118W-A	YDR118W-A	117 nt		4.45	□□□□□ -1.7
NIT3	P49954	YDR381C-A	YDR381C-A	345 nt		4.45	□□□□□ -1.7
NIT3	P49954	VAB2	YEL005C	849 nt		4.45	□□□□□ -1.7
NIT3	P49954	QCR10	YHR001W-A	234 nt		4.45	□□□□□ -1.7
NIT3	P49954	LOH1	YJL038C	660 nt		4.45	□□□□□ -1.7
NIT3	P49954	YJL114W	YJL114W	681 nt		4.45	□□□□□ -1.7
NIT3	P49954	YKL065W-A	YKL065W-A	222 nt		4.45	□□□□□ -1.7
NIT3	P49954	TSR4	YOL022C	1227 nt		4.45	□□□□□ -1.7
NIT3	P49954	TOA1	YOR194C	861 nt		4.45	□□□□□ -1.7
NIT3	P49954	SSO1	YPL232W	873 nt		4.45	□□□□□ -1.7
NIT3	P49954	SCD6	YPR129W	1050 nt		4.45	□□□□□ -1.7
NIT3	P49954	CHK1	YBR274W	1584 nt		4.44	□□□□□ -1.7
NIT3	P49954	GRC3	YLL035W	1899 nt		4.44	□□□□□ -1.7
NIT3	P49954	YDL163W	YDL163W	303 nt		4.44	□□□□□ -1.7
NIT3	P49954	DAD1	YDR016C	285 nt		4.44	□□□□□ -1.7
NIT3	P49954	YDR134C	YDR134C	411 nt		4.44	□□□□□ -1.7
NIT3	P49954	YEL030C-A	YEL030C-A	315 nt		4.44	□□□□□ -1.7
NIT3	P49954	YHR097C	YHR097C	1101 nt		4.44	□□□□□ -1.7
NIT3	P49954	NIT2	YJL126W	924 nt		4.44	□□□□□ -1.7
NIT3	P49954	YMR254C	YMR254C	309 nt		4.44	□□□□□ -1.7
NIT3	P49954	YOR186W	YOR186W	435 nt		4.44	□□□□□ -1.7
NIT3	P49954	CSM4	YPL200W	471 nt		4.44	□□□□□ -1.7
NIT3	P49954	CBP3	YPL215W	1008 nt		4.44	□□□□□ -1.7

Retrieved 100 of 7,029 protein–RNA pairs in 42.8 ms