Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPAP49450 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CENPAP49450 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CENPAP49450 SRD5A1P1-201ENST00000442297 786 ntBASIC19.37■□□□□ 0.69
CENPAP49450 MIR3621-201ENST00000580529 85 ntBASIC19.37■□□□□ 0.69
CENPAP49450 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CENPAP49450 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CENPAP49450 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPAP49450 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CENPAP49450 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CENPAP49450 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.36■□□□□ 0.69
CENPAP49450 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
CENPAP49450 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPAP49450 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CENPAP49450 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPAP49450 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CENPAP49450 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CENPAP49450 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPAP49450 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPAP49450 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPAP49450 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPAP49450 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPAP49450 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPAP49450 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPAP49450 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.35■□□□□ 0.69
CENPAP49450 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPAP49450 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.35■□□□□ 0.69
CENPAP49450 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPAP49450 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPAP49450 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPAP49450 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CENPAP49450 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CENPAP49450 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.34■□□□□ 0.69
CENPAP49450 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPAP49450 AL356441.2-201ENST00000443009 864 ntBASIC19.34■□□□□ 0.69
CENPAP49450 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.34■□□□□ 0.69
CENPAP49450 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.34■□□□□ 0.69
CENPAP49450 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CENPAP49450 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CENPAP49450 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPAP49450 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.33■□□□□ 0.68
CENPAP49450 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPAP49450 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CENPAP49450 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CENPAP49450 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.33■□□□□ 0.68
CENPAP49450 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPAP49450 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPAP49450 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPAP49450 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPAP49450 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.32■□□□□ 0.68
CENPAP49450 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPAP49450 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.32■□□□□ 0.68
CENPAP49450 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.32■□□□□ 0.68
CENPAP49450 AC068587.7-201ENST00000641602 218 ntBASIC19.32■□□□□ 0.68
CENPAP49450 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CENPAP49450 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPAP49450 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPAP49450 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.31■□□□□ 0.68
CENPAP49450 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.31■□□□□ 0.68
CENPAP49450 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.31■□□□□ 0.68
CENPAP49450 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPAP49450 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CENPAP49450 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPAP49450 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.31■□□□□ 0.68
CENPAP49450 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPAP49450 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CENPAP49450 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPAP49450 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPAP49450 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPAP49450 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPAP49450 AC007375.3-201ENST00000600936 2314 ntBASIC19.3■□□□□ 0.68
CENPAP49450 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPAP49450 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPAP49450 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPAP49450 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPAP49450 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPAP49450 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPAP49450 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.3■□□□□ 0.68
CENPAP49450 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.3■□□□□ 0.68
CENPAP49450 MIR3181-201ENST00000578512 73 ntBASIC19.3■□□□□ 0.68
CENPAP49450 AC092171.4-201ENST00000609130 632 ntBASIC19.3■□□□□ 0.68
CENPAP49450 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.3■□□□□ 0.68
CENPAP49450 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.3■□□□□ 0.68
CENPAP49450 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms