Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 YCR101CYCR101C 549 nt5.94□□□□□ -1.46
TY1A-JR2P47099 ARF2YDL137W 546 nt5.94□□□□□ -1.46
TY1A-JR2P47099 YIR020CYIR020C 303 nt5.94□□□□□ -1.46
TY1A-JR2P47099 YLR031WYLR031W 561 nt5.94□□□□□ -1.46
TY1A-JR2P47099 YML018CYML018C 1182 nt5.94□□□□□ -1.46
TY1A-JR2P47099 TAF14YPL129W 735 nt5.94□□□□□ -1.46
TY1A-JR2P47099 SKI2YLR398C 3864 nt5.94□□□□□ -1.46
TY1A-JR2P47099 HRR25YPL204W 1485 nt5.94□□□□□ -1.46
TY1A-JR2P47099 ARB1YER036C 1833 nt5.94□□□□□ -1.46
TY1A-JR2P47099 CHA4YLR098C 1947 nt5.93□□□□□ -1.46
TY1A-JR2P47099 EMW1YNL313C 2715 nt5.93□□□□□ -1.46
TY1A-JR2P47099 ASI3YNL008C 2031 nt5.93□□□□□ -1.46
TY1A-JR2P47099 YER038W-AYER038W-A 381 nt5.93□□□□□ -1.46
TY1A-JR2P47099 CIS3YJL158C 684 nt5.93□□□□□ -1.46
TY1A-JR2P47099 RPL17BYJL177W 555 nt5.93□□□□□ -1.46
TY1A-JR2P47099 UTP11YKL099C 753 nt5.93□□□□□ -1.46
TY1A-JR2P47099 SMA2YML066C 1110 nt5.93□□□□□ -1.46
TY1A-JR2P47099 ISF1YMR081C 1017 nt5.93□□□□□ -1.46
TY1A-JR2P47099 YBR032WYBR032W 303 nt5.93□□□□□ -1.46
TY1A-JR2P47099 ERO1YML130C 1692 nt5.93□□□□□ -1.46
TY1A-JR2P47099 SUB2YDL084W 1341 nt5.93□□□□□ -1.46
TY1A-JR2P47099 YBR012W-AYBR012W-A 1323 nt5.93□□□□□ -1.46
TY1A-JR2P47099 YOR142W-AYOR142W-A 1323 nt5.93□□□□□ -1.46
TY1A-JR2P47099 YPR158W-AYPR158W-A 1323 nt5.93□□□□□ -1.46
TY1A-JR2P47099 GPB1YOR371C 2694 nt5.92□□□□□ -1.46
TY1A-JR2P47099 MDL1YLR188W 2088 nt5.92□□□□□ -1.46
TY1A-JR2P47099 UTP9YHR196W 1728 nt5.92□□□□□ -1.46
TY1A-JR2P47099 GCS1YDL226C 1059 nt5.92□□□□□ -1.46
TY1A-JR2P47099 TFB3YDR460W 966 nt5.92□□□□□ -1.46
TY1A-JR2P47099 RSM25YIL093C 795 nt5.92□□□□□ -1.46
TY1A-JR2P47099 RDN5-2RDN5-2 119 nt5.92□□□□□ -1.46
TY1A-JR2P47099 RDN5-3RDN5-3 119 nt5.92□□□□□ -1.46
TY1A-JR2P47099 RDN5-4RDN5-4 119 nt5.92□□□□□ -1.46
TY1A-JR2P47099 RDN5-5RDN5-5 119 nt5.92□□□□□ -1.46
TY1A-JR2P47099 SUP35YDR172W 2058 nt5.92□□□□□ -1.46
TY1A-JR2P47099 VPS33YLR396C 2076 nt5.92□□□□□ -1.46
TY1A-JR2P47099 POP1YNL221C 2628 nt5.91□□□□□ -1.46
TY1A-JR2P47099 QCR6YFR033C 444 nt5.91□□□□□ -1.46
TY1A-JR2P47099 SAE2YGL175C 1038 nt5.91□□□□□ -1.46
TY1A-JR2P47099 VTI1YMR197C 654 nt5.91□□□□□ -1.46
TY1A-JR2P47099 YMR307C-AYMR307C-A 195 nt5.91□□□□□ -1.46
TY1A-JR2P47099 HEM4YOR278W 828 nt5.91□□□□□ -1.46
TY1A-JR2P47099 RDL2YOR286W 450 nt5.91□□□□□ -1.46
TY1A-JR2P47099 CAM1YPL048W 1248 nt5.91□□□□□ -1.46
TY1A-JR2P47099 YPL135C-AYPL135C-A 174 nt5.91□□□□□ -1.46
TY1A-JR2P47099 VHR1YIL056W 1923 nt5.91□□□□□ -1.46
TY1A-JR2P47099 NGL3YML118W 1518 nt5.9□□□□□ -1.46
TY1A-JR2P47099 YIL055CYIL055C 1884 nt5.9□□□□□ -1.46
TY1A-JR2P47099 YER079C-AYER079C-A 339 nt5.9□□□□□ -1.46
TY1A-JR2P47099 VOA1YGR106C 798 nt5.9□□□□□ -1.46
TY1A-JR2P47099 RNR4YGR180C 1038 nt5.9□□□□□ -1.46
TY1A-JR2P47099 BET5YML077W 480 nt5.9□□□□□ -1.46
TY1A-JR2P47099 RAD14YMR201C 1116 nt5.9□□□□□ -1.46
TY1A-JR2P47099 INN1YNL152W 1230 nt5.9□□□□□ -1.46
TY1A-JR2P47099 NRM1YNR009W 750 nt5.9□□□□□ -1.46
TY1A-JR2P47099 YPL107WYPL107W 747 nt5.9□□□□□ -1.46
TY1A-JR2P47099 DER1YBR201W 636 nt5.9□□□□□ -1.46
TY1A-JR2P47099 IMA5YJL216C 1746 nt5.9□□□□□ -1.47
TY1A-JR2P47099 NTH1YDR001C 2256 nt5.9□□□□□ -1.47
TY1A-JR2P47099 PAC2YER007W 1557 nt5.89□□□□□ -1.47
TY1A-JR2P47099 APS3YJL024C 585 nt5.89□□□□□ -1.47
TY1A-JR2P47099 YKL107WYKL107W 930 nt5.89□□□□□ -1.47
TY1A-JR2P47099 NOP15YNL110C 663 nt5.89□□□□□ -1.47
TY1A-JR2P47099 RPL18AYOL120C 561 nt5.89□□□□□ -1.47
TY1A-JR2P47099 CDC33YOL139C 642 nt5.89□□□□□ -1.47
TY1A-JR2P47099 YPL152W-AYPL152W-A 99 nt5.89□□□□□ -1.47
TY1A-JR2P47099 PTK2YJR059W 2457 nt5.89□□□□□ -1.47
TY1A-JR2P47099 BFR1YOR198C 1413 nt5.89□□□□□ -1.47
TY1A-JR2P47099 YDL009CYDL009C 324 nt5.88□□□□□ -1.47
TY1A-JR2P47099 SUF3tG(CCC)D 72 nt5.88□□□□□ -1.47
TY1A-JR2P47099 THR1YHR025W 1074 nt5.88□□□□□ -1.47
TY1A-JR2P47099 YKL070WYKL070W 510 nt5.88□□□□□ -1.47
TY1A-JR2P47099 RHO4YKR055W 876 nt5.88□□□□□ -1.47
TY1A-JR2P47099 ATP14YLR295C 375 nt5.88□□□□□ -1.47
TY1A-JR2P47099 YLR434CYLR434C 384 nt5.88□□□□□ -1.47
TY1A-JR2P47099 PAI3YMR174C 207 nt5.88□□□□□ -1.47
TY1A-JR2P47099 TRM112YNR046W 408 nt5.88□□□□□ -1.47
TY1A-JR2P47099 TUF1YOR187W 1314 nt5.88□□□□□ -1.47
TY1A-JR2P47099 ERG1YGR175C 1491 nt5.88□□□□□ -1.47
TY1A-JR2P47099 DAL5YJR152W 1632 nt5.88□□□□□ -1.47
TY1A-JR2P47099 YER023C-AYER023C-A 213 nt5.87□□□□□ -1.47
TY1A-JR2P47099 RPL1BYGL135W 654 nt5.87□□□□□ -1.47
TY1A-JR2P47099 REE1YJL217W 597 nt5.87□□□□□ -1.47
TY1A-JR2P47099 EMC2YJR088C 879 nt5.87□□□□□ -1.47
TY1A-JR2P47099 YLL044WYLL044W 447 nt5.87□□□□□ -1.47
TY1A-JR2P47099 YBL039W-BYBL039W-B 180 nt5.87□□□□□ -1.47
TY1A-JR2P47099 COX5AYNL052W 462 nt5.87□□□□□ -1.47
TY1A-JR2P47099 YNL092WYNL092W 1203 nt5.87□□□□□ -1.47
TY1A-JR2P47099 RPL1AYPL220W 654 nt5.87□□□□□ -1.47
TY1A-JR2P47099 snR36snR36 182 nt5.87□□□□□ -1.47
TY1A-JR2P47099 BRN1YBL097W 2265 nt5.87□□□□□ -1.47
TY1A-JR2P47099 STB5YHR178W 2232 nt5.86□□□□□ -1.47
TY1A-JR2P47099 HSP82YPL240C 2130 nt5.86□□□□□ -1.47
TY1A-JR2P47099 SWC4YGR002C 1431 nt5.86□□□□□ -1.47
TY1A-JR2P47099 tA(AGC)DtA(AGC)D 73 nt5.86□□□□□ -1.47
TY1A-JR2P47099 tA(AGC)FtA(AGC)F 73 nt5.86□□□□□ -1.47
TY1A-JR2P47099 tA(AGC)GtA(AGC)G 73 nt5.86□□□□□ -1.47
TY1A-JR2P47099 tA(AGC)HtA(AGC)H 73 nt5.86□□□□□ -1.47
TY1A-JR2P47099 tA(AGC)JtA(AGC)J 73 nt5.86□□□□□ -1.47
TY1A-JR2P47099 tA(AGC)K1tA(AGC)K1 73 nt5.86□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms