Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.44■□□□□ 0.7
APOBEC1P41238 AL354811.1-201ENST00000610286 706 ntBASIC19.44■□□□□ 0.7
APOBEC1P41238 AL358852.1-201ENST00000623174 1268 ntBASIC19.44■□□□□ 0.7
APOBEC1P41238 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC1P41238 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
APOBEC1P41238 FAM99A-202ENST00000538190 1989 ntBASIC19.44■□□□□ 0.7
APOBEC1P41238 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC1P41238 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOBEC1P41238 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.44■□□□□ 0.7
APOBEC1P41238 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
APOBEC1P41238 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
APOBEC1P41238 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.43■□□□□ 0.7
APOBEC1P41238 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.43■□□□□ 0.7
APOBEC1P41238 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.43■□□□□ 0.7
APOBEC1P41238 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
APOBEC1P41238 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.43■□□□□ 0.7
APOBEC1P41238 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.43■□□□□ 0.7
APOBEC1P41238 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APOBEC1P41238 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
APOBEC1P41238 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC1P41238 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC1P41238 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC1P41238 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
APOBEC1P41238 BX005040.4-201ENST00000637145 1518 ntBASIC19.42■□□□□ 0.7
APOBEC1P41238 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC1P41238 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC1P41238 AC012414.1-201ENST00000556676 535 ntBASIC19.42■□□□□ 0.7
APOBEC1P41238 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC1P41238 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
APOBEC1P41238 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
APOBEC1P41238 AC009237.3-201ENST00000393279 1427 ntBASIC19.42■□□□□ 0.7
APOBEC1P41238 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOBEC1P41238 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APOBEC1P41238 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.41■□□□□ 0.7
APOBEC1P41238 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.41■□□□□ 0.7
APOBEC1P41238 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
APOBEC1P41238 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.41■□□□□ 0.7
APOBEC1P41238 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
APOBEC1P41238 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.41■□□□□ 0.7
APOBEC1P41238 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOBEC1P41238 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.41■□□□□ 0.7
APOBEC1P41238 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.41■□□□□ 0.7
APOBEC1P41238 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.41■□□□□ 0.7
APOBEC1P41238 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC1P41238 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.4■□□□□ 0.7
APOBEC1P41238 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.4■□□□□ 0.7
APOBEC1P41238 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.4■□□□□ 0.7
APOBEC1P41238 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC1P41238 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC1P41238 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC1P41238 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOBEC1P41238 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
APOBEC1P41238 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APOBEC1P41238 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APOBEC1P41238 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.39■□□□□ 0.69
APOBEC1P41238 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
APOBEC1P41238 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
APOBEC1P41238 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.39■□□□□ 0.69
APOBEC1P41238 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.39■□□□□ 0.69
APOBEC1P41238 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APOBEC1P41238 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
APOBEC1P41238 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APOBEC1P41238 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOBEC1P41238 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOBEC1P41238 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
APOBEC1P41238 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOBEC1P41238 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOBEC1P41238 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
APOBEC1P41238 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOBEC1P41238 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOBEC1P41238 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
APOBEC1P41238 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.38■□□□□ 0.69
APOBEC1P41238 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
APOBEC1P41238 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.38■□□□□ 0.69
APOBEC1P41238 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms