Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 TAF14YPL129W 735 nt2.68□□□□□ -1.98
PGD1P40356 MCM16YPR046W 546 nt2.68□□□□□ -1.98
PGD1P40356 SPN1YPR133C 1233 nt2.68□□□□□ -1.98
PGD1P40356 CHK1YBR274W 1584 nt2.68□□□□□ -1.98
PGD1P40356 SEC15YGL233W 2733 nt2.68□□□□□ -1.98
PGD1P40356 DSN1YIR010W 1731 nt2.68□□□□□ -1.98
PGD1P40356 YGR117CYGR117C 1431 nt2.68□□□□□ -1.98
PGD1P40356 HMS1YOR032C 1305 nt2.68□□□□□ -1.98
PGD1P40356 CLB5YPR120C 1308 nt2.68□□□□□ -1.98
PGD1P40356 DNM1YLL001W 2274 nt2.67□□□□□ -1.98
PGD1P40356 ESL1YIL151C 3357 nt2.67□□□□□ -1.98
PGD1P40356 FUN30YAL019W 3396 nt2.67□□□□□ -1.98
PGD1P40356 LTV1YKL143W 1392 nt2.67□□□□□ -1.98
PGD1P40356 snR57snR57 88 nt2.67□□□□□ -1.98
PGD1P40356 MSW1YDR268W 1140 nt2.67□□□□□ -1.98
PGD1P40356 YPR1YDR368W 939 nt2.67□□□□□ -1.98
PGD1P40356 PNC1YGL037C 651 nt2.67□□□□□ -1.98
PGD1P40356 COX19YLL018C-A 297 nt2.67□□□□□ -1.98
PGD1P40356 YLR225CYLR225C 1224 nt2.67□□□□□ -1.98
PGD1P40356 GOT1YMR292W 417 nt2.67□□□□□ -1.98
PGD1P40356 RUF5-1RUF5-1 710 nt2.67□□□□□ -1.98
PGD1P40356 RUF5-2RUF5-2 710 nt2.67□□□□□ -1.98
PGD1P40356 YBR238CYBR238C 2196 nt2.67□□□□□ -1.98
PGD1P40356 XRN1YGL173C 4587 nt2.67□□□□□ -1.98
PGD1P40356 PSY4YBL046W 1326 nt2.67□□□□□ -1.98
PGD1P40356 DYN1YKR054C 12279 nt2.67□□□□□ -1.98
PGD1P40356 BPT1YLL015W 4680 nt2.66□□□□□ -1.98
PGD1P40356 RAD7YJR052W 1698 nt2.66□□□□□ -1.98
PGD1P40356 GCD6YDR211W 2139 nt2.66□□□□□ -1.98
PGD1P40356 PRP8YHR165C 7242 nt2.66□□□□□ -1.98
PGD1P40356 YDL162CYDL162C 357 nt2.66□□□□□ -1.98
PGD1P40356 MTR2YKL186C 555 nt2.66□□□□□ -1.98
PGD1P40356 SEC65YML105C 822 nt2.66□□□□□ -1.98
PGD1P40356 YPL107WYPL107W 747 nt2.66□□□□□ -1.98
PGD1P40356 MRPL37YBR268W 318 nt2.66□□□□□ -1.98
PGD1P40356 CBP2YHL038C 1893 nt2.66□□□□□ -1.98
PGD1P40356 RAD2YGR258C 3096 nt2.66□□□□□ -1.98
PGD1P40356 KRE2YDR483W 1329 nt2.66□□□□□ -1.98
PGD1P40356 CDC20YGL116W 1833 nt2.65□□□□□ -1.98
PGD1P40356 MDV1YJL112W 2145 nt2.65□□□□□ -1.98
PGD1P40356 ITC1YGL133W 3795 nt2.65□□□□□ -1.99
PGD1P40356 YCR007CYCR007C 720 nt2.65□□□□□ -1.99
PGD1P40356 YDR391CYDR391C 699 nt2.65□□□□□ -1.99
PGD1P40356 tL(UAG)JtL(UAG)J 82 nt2.65□□□□□ -1.99
PGD1P40356 tL(UAG)L1tL(UAG)L1 82 nt2.65□□□□□ -1.99
PGD1P40356 tL(UAG)L2tL(UAG)L2 82 nt2.65□□□□□ -1.99
PGD1P40356 YHR086W-AYHR086W-A 162 nt2.65□□□□□ -1.99
PGD1P40356 ARC15YIL062C 465 nt2.65□□□□□ -1.99
PGD1P40356 YIL089WYIL089W 618 nt2.65□□□□□ -1.99
PGD1P40356 SDP1YIL113W 630 nt2.65□□□□□ -1.99
PGD1P40356 UTP11YKL099C 753 nt2.65□□□□□ -1.99
PGD1P40356 DDI3YNL335W 678 nt2.65□□□□□ -1.99
PGD1P40356 DIM1YPL266W 957 nt2.65□□□□□ -1.99
PGD1P40356 VPS17YOR132W 1656 nt2.65□□□□□ -1.99
PGD1P40356 SRB8YCR081W 4284 nt2.65□□□□□ -1.99
PGD1P40356 ERG11YHR007C 1593 nt2.65□□□□□ -1.99
PGD1P40356 PUF6YDR496C 1971 nt2.65□□□□□ -1.99
PGD1P40356 COM2YER130C 1332 nt2.65□□□□□ -1.99
PGD1P40356 PRP31YGR091W 1485 nt2.65□□□□□ -1.99
PGD1P40356 DUF1YOL087C 3351 nt2.64□□□□□ -1.99
PGD1P40356 YGR219WYGR219W 342 nt2.64□□□□□ -1.99
PGD1P40356 CPR7YJR032W 1182 nt2.64□□□□□ -1.99
PGD1P40356 MRPL20YKR085C 588 nt2.64□□□□□ -1.99
PGD1P40356 NDJ1YOL104C 1059 nt2.64□□□□□ -1.99
PGD1P40356 MTH1YDR277C 1302 nt2.64□□□□□ -1.99
PGD1P40356 CEP3YMR168C 1827 nt2.63□□□□□ -1.99
PGD1P40356 AGA1YNR044W 2178 nt2.63□□□□□ -1.99
PGD1P40356 YVC1YOR087W 2028 nt2.63□□□□□ -1.99
PGD1P40356 ECM29YHL030W 5607 nt2.63□□□□□ -1.99
PGD1P40356 ARG2YJL071W 1725 nt2.63□□□□□ -1.99
PGD1P40356 CTK1YKL139W 1587 nt2.63□□□□□ -1.99
PGD1P40356 GRX6YDL010W 696 nt2.63□□□□□ -1.99
PGD1P40356 TOS8YGL096W 831 nt2.63□□□□□ -1.99
PGD1P40356 TYS1YGR185C 1185 nt2.63□□□□□ -1.99
PGD1P40356 AIM25YJR100C 984 nt2.63□□□□□ -1.99
PGD1P40356 MCM1YMR043W 861 nt2.63□□□□□ -1.99
PGD1P40356 YNL181WYNL181W 1224 nt2.63□□□□□ -1.99
PGD1P40356 PLP2YOR281C 861 nt2.63□□□□□ -1.99
PGD1P40356 FES1YBR101C 873 nt2.63□□□□□ -1.99
PGD1P40356 YMR1YJR110W 2067 nt2.63□□□□□ -1.99
PGD1P40356 CHO2YGR157W 2610 nt2.63□□□□□ -1.99
PGD1P40356 MET10YFR030W 3108 nt2.63□□□□□ -1.99
PGD1P40356 PAF1YBR279W 1338 nt2.63□□□□□ -1.99
PGD1P40356 SEC7YDR170C 6030 nt2.62□□□□□ -1.99
PGD1P40356 MSM1YGR171C 1728 nt2.62□□□□□ -1.99
PGD1P40356 YPK3YBR028C 1578 nt2.62□□□□□ -1.99
PGD1P40356 COX18YGR062C 951 nt2.62□□□□□ -1.99
PGD1P40356 YGR149WYGR149W 1299 nt2.62□□□□□ -1.99
PGD1P40356 YGR161W-CYGR161W-C 279 nt2.62□□□□□ -1.99
PGD1P40356 PEX21YGR239C 867 nt2.62□□□□□ -1.99
PGD1P40356 YNL144W-AYNL144W-A 84 nt2.62□□□□□ -1.99
PGD1P40356 INN1YNL152W 1230 nt2.62□□□□□ -1.99
PGD1P40356 HMT1YBR034C 1047 nt2.62□□□□□ -1.99
PGD1P40356 PPT2YPL148C 522 nt2.62□□□□□ -1.99
PGD1P40356 RAX2YLR084C 3663 nt2.62□□□□□ -1.99
PGD1P40356 MSA1YOR066W 1890 nt2.62□□□□□ -1.99
PGD1P40356 DAP2YHR028C 2457 nt2.62□□□□□ -1.99
PGD1P40356 PFF1YBR074W 2931 nt2.62□□□□□ -1.99
PGD1P40356 YPS6YIR039C 1614 nt2.61□□□□□ -1.99
PGD1P40356 MEF1YLR069C 2286 nt2.61□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms