Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.37■□□□□ 0.85
RPL3P39023 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.37■□□□□ 0.85
RPL3P39023 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.37■□□□□ 0.85
RPL3P39023 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPL3P39023 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RPL3P39023 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.36■□□□□ 0.85
RPL3P39023 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.36■□□□□ 0.85
RPL3P39023 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.36■□□□□ 0.85
RPL3P39023 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPL3P39023 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.36■□□□□ 0.85
RPL3P39023 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.36■□□□□ 0.85
RPL3P39023 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RPL3P39023 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.36■□□□□ 0.85
RPL3P39023 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPL3P39023 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.35■□□□□ 0.85
RPL3P39023 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RPL3P39023 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.35■□□□□ 0.85
RPL3P39023 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RPL3P39023 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.35■□□□□ 0.85
RPL3P39023 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RPL3P39023 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPL3P39023 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
RPL3P39023 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RPL3P39023 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPL3P39023 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPL3P39023 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPL3P39023 SLC47A1P1-202ENST00000449666 945 ntBASIC20.34■□□□□ 0.85
RPL3P39023 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPL3P39023 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
RPL3P39023 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
RPL3P39023 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RPL3P39023 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPL3P39023 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.33■□□□□ 0.85
RPL3P39023 AL136116.3-201ENST00000402907 1138 ntBASIC20.33■□□□□ 0.85
RPL3P39023 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPL3P39023 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.33■□□□□ 0.85
RPL3P39023 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.33■□□□□ 0.85
RPL3P39023 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
RPL3P39023 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.33■□□□□ 0.85
RPL3P39023 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPL3P39023 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RPL3P39023 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL3P39023 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.32■□□□□ 0.84
RPL3P39023 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.32■□□□□ 0.84
RPL3P39023 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL3P39023 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL3P39023 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPL3P39023 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RPL3P39023 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPL3P39023 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.32■□□□□ 0.84
RPL3P39023 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPL3P39023 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.32■□□□□ 0.84
RPL3P39023 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL3P39023 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPL3P39023 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL3P39023 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RPL3P39023 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL3P39023 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL3P39023 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL3P39023 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL3P39023 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.31■□□□□ 0.84
RPL3P39023 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.31■□□□□ 0.84
RPL3P39023 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RPL3P39023 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.31■□□□□ 0.84
RPL3P39023 AC026310.3-201ENST00000625186 2373 ntBASIC20.31■□□□□ 0.84
RPL3P39023 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPL3P39023 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RPL3P39023 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms