Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL4A5P29400 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
COL4A5P29400 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL4A5P29400 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.16■■□□□ 1.78
COL4A5P29400 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL4A5P29400 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL4A5P29400 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL4A5P29400 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL4A5P29400 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL4A5P29400 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL4A5P29400 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.15■■□□□ 1.78
COL4A5P29400 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.15■■□□□ 1.78
COL4A5P29400 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL4A5P29400 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.15■■□□□ 1.78
COL4A5P29400 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL4A5P29400 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.15■■□□□ 1.78
COL4A5P29400 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL4A5P29400 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.14■■□□□ 1.78
COL4A5P29400 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
COL4A5P29400 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL4A5P29400 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.14■■□□□ 1.78
COL4A5P29400 AL596275.1-201ENST00000423464 877 ntBASIC26.14■■□□□ 1.78
COL4A5P29400 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
COL4A5P29400 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
COL4A5P29400 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.14■■□□□ 1.78
COL4A5P29400 OR10C1-204ENST00000622521 1039 ntBASIC26.14■■□□□ 1.78
COL4A5P29400 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.14■■□□□ 1.77
COL4A5P29400 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
COL4A5P29400 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL4A5P29400 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL4A5P29400 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL4A5P29400 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL4A5P29400 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL4A5P29400 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.13■■□□□ 1.77
COL4A5P29400 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL4A5P29400 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
COL4A5P29400 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
COL4A5P29400 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.13■■□□□ 1.77
COL4A5P29400 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL4A5P29400 AP004607.7-201ENST00000527152 1677 ntBASIC26.13■■□□□ 1.77
COL4A5P29400 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A5P29400 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A5P29400 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A5P29400 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.12■■□□□ 1.77
COL4A5P29400 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.12■■□□□ 1.77
COL4A5P29400 BX276092.2-201ENST00000417668 665 ntBASIC26.12■■□□□ 1.77
COL4A5P29400 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.12■■□□□ 1.77
COL4A5P29400 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.12■■□□□ 1.77
COL4A5P29400 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.12■■□□□ 1.77
COL4A5P29400 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A5P29400 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A5P29400 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
COL4A5P29400 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
COL4A5P29400 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.12■■□□□ 1.77
COL4A5P29400 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.12■■□□□ 1.77
COL4A5P29400 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.12■■□□□ 1.77
COL4A5P29400 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.12■■□□□ 1.77
COL4A5P29400 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
COL4A5P29400 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.12■■□□□ 1.77
COL4A5P29400 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.11■■□□□ 1.77
COL4A5P29400 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A5P29400 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.11■■□□□ 1.77
COL4A5P29400 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.11■■□□□ 1.77
COL4A5P29400 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A5P29400 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A5P29400 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A5P29400 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A5P29400 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A5P29400 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
COL4A5P29400 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A5P29400 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
COL4A5P29400 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
COL4A5P29400 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A5P29400 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
COL4A5P29400 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A5P29400 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.09■■□□□ 1.77
COL4A5P29400 AC079089.2-201ENST00000531211 1277 ntBASIC26.09■■□□□ 1.77
COL4A5P29400 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
COL4A5P29400 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
COL4A5P29400 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A5P29400 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.09■■□□□ 1.77
COL4A5P29400 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.09■■□□□ 1.77
COL4A5P29400 ESRRAP1-201ENST00000400596 1257 ntBASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms