Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SHC1P29353 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.64■□□□□ 0.73
SHC1P29353 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SHC1P29353 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 AC010141.3-201ENST00000456659 717 ntBASIC19.63■□□□□ 0.73
SHC1P29353 AC068587.7-201ENST00000641602 218 ntBASIC19.63■□□□□ 0.73
SHC1P29353 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC1P29353 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.63■□□□□ 0.73
SHC1P29353 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.63■□□□□ 0.73
SHC1P29353 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SHC1P29353 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC1P29353 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.62■□□□□ 0.73
SHC1P29353 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC1P29353 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SHC1P29353 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC1P29353 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
SHC1P29353 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC1P29353 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SHC1P29353 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SHC1P29353 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC1P29353 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SHC1P29353 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.61■□□□□ 0.73
SHC1P29353 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC1P29353 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC1P29353 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SHC1P29353 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC1P29353 AC080038.3-201ENST00000623346 1952 ntBASIC19.61■□□□□ 0.73
SHC1P29353 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC1P29353 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC1P29353 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC1P29353 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC1P29353 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC1P29353 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC1P29353 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC1P29353 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC1P29353 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC1P29353 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SHC1P29353 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SHC1P29353 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.59■□□□□ 0.73
SHC1P29353 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.59■□□□□ 0.73
SHC1P29353 AC087239.1-201ENST00000622671 572 ntBASIC19.59■□□□□ 0.73
SHC1P29353 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.59■□□□□ 0.73
SHC1P29353 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.59■□□□□ 0.73
SHC1P29353 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC1P29353 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC1P29353 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC1P29353 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC1P29353 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.58■□□□□ 0.73
SHC1P29353 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHC1P29353 FBXW4P1-201ENST00000426721 2239 ntBASIC19.58■□□□□ 0.73
SHC1P29353 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.58■□□□□ 0.73
SHC1P29353 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.58■□□□□ 0.73
SHC1P29353 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC1P29353 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHC1P29353 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.58■□□□□ 0.72
SHC1P29353 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms